Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02339 and BSU13970

See Amino acid alignment / Visit BSNT_02339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:01
# Commandline: needle
#    -asequence dna-align/BSNT_02339___ykwD.1.22522.seq
#    -bsequence dna-align/BSU13970___ykwD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02339___ykwD-BSU13970___ykwD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02339___ykwD-BSU13970___ykwD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02339___ykwD
# 2: BSU13970___ykwD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     705/774 (91.1%)
# Similarity:   705/774 (91.1%)
# Gaps:          51/774 ( 6.6%)
# Score: 3424.5
# 
#
#=======================================

BSNT_02339___      1 ATGAAGAAAGCATTTATTTTATCTGCTGCCGCTGCGGTTGGATTATTCAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk      1 ATGAAGAAAGCATTTATTTTATCTGCTGCCGCTGCGGTTGGATTATTCAC     50

BSNT_02339___     51 ATTCGGGGGCGTACAGCAAGCATCAGCGAAAGAACTCTCCTGCCAGCCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk     51 ATTCGGGGGCGTACAGCAAGCATCAGCGAAAGAACTCTCCTGCCAGCCTG    100

BSNT_02339___    101 TGGTTACAGTAAAAACGGGGAACACAGTACAAAACATGTCACTTAACGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    101 TGGTTACAGTAAAAACGGGGAACACAGTACAAAACATGTCACTTAACGAT    150

BSNT_02339___    151 GCAGTGAAAAAACTGCATATTAACACAAATATCAAAACGTTAAACGCTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    151 GCAGTGAAAAAACTGCATATTAACACAAATATCAAAACGTTAAACGCTGC    200

BSNT_02339___    201 AAACGAAAAAGAGATTAAGCAGTTTCTTCAAAAACATGCGAAGCAATCTA    250
                     |||||||||||||||.||||||.|||||||||||||||||||||||||||
BSU13970___yk    201 AAACGAAAAAGAGATGAAGCAGCTTCTTCAAAAACATGCGAAGCAATCTA    250

BSNT_02339___    251 ACGTGAAAGTTCAGGATGTTCAAAAGACAGAAACGGCCAAACCTGCACAA    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU13970___yk    251 ACGTGAAAGTTCAGGATGTTCAAAAGACAGAAACGGCAAAACCTGCACAA    300

BSNT_02339___    301 AAGACTACTGAAAAAGCAGCTGCTGATCAAAACACTGCTTCTAAAGCACC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    301 AAGACTACTGAAAAAGCAGCTGCTGATCAAAACACTGCTTCTAAAGCACC    350

BSNT_02339___    351 CGCAACTGCTGAAAAAACAAACACAACAACATCTGCACCTTCATCTGTAA    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU13970___yk    351 CGCAACTGCTGAAAAAACAAACACAACAACGTCTGCACCTTCATCTGTAA    400

BSNT_02339___    401 GTGCATACGAGAAAAAAGTTGTTGAACTTACAAATGCAGAAAGACAAAAA    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    401 GTGCATATGAGAAAAAAGTTGTTGAACTTACAAATGCAGAAAGACAAAAA    450

BSNT_02339___    451 CAAGGATTAAAGCCGCTTCAAATTGATGAAACGTTAAGCAAATCTGCACG    500
                     |||||.|||||.||||||||||||||||||||||||||||||||||||||
BSU13970___yk    451 CAAGGCTTAAAACCGCTTCAAATTGATGAAACGTTAAGCAAATCTGCACG    500

BSNT_02339___    501 AGCAAAATCTCAGGATATGAAGGACAAAAACTACTTTGATCACCAAAGCC    550
                     .||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13970___yk    501 CGCAAAATCTCAGGATATGAAAGACAAAAACTACTTTGATCACCAAAGCC    550

BSNT_02339___    551 CAACATACGGCTCACCGTTTGATATGATGAAATCTTTCGGAATCAGCTAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    551 CAACATACGGCTCACCGTTTGATATGATGAAATCTTTCGGAATCAGCTAC    600

BSNT_02339___    601 AAAACAGCAGGTGAAAACATTGCGAAGGGCCAAAAGACACCAGAAGAAGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    601 AAAACAGCAGGTGAAAACATTGCGAAGGGCCAAAAGACACCAGAAGAAGT    650

BSNT_02339___    651 AGTAAAAGCTTGGATGAACAGTGAAGGACACAGAAAAAACATTCTAAAC-    699
                     ||||||||||||||||||||||||||||||||||||||||||||||||| 
BSU13970___yk    651 AGTAAAAGCTTGGATGAACAGTGAAGGACACAGAAAAAACATTCTAAACC    700

BSNT_02339___    700 ----------------GGGAGT--GTAATATTAACTGTGTAA--------    723
                                     .||.||  ||.|..||.|.|.||.||        
BSU13970___yk    701 CTAACTTTACTCACATCGGTGTTGGTTACGTTGAGTCTGGAAGCATCTGG    750

BSNT_02339___    723 ------------------------    723
                                             
BSU13970___yk    751 ACACAACAATTCATCGGAAAATAA    774


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