Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02353 and BSU14050

See Amino acid alignment / Visit BSNT_02353 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:03
# Commandline: needle
#    -asequence dna-align/BSNT_02353___ykuE.1.22522.seq
#    -bsequence dna-align/BSU14050___ykuE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02353___ykuE-BSU14050___ykuE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02353___ykuE-BSU14050___ykuE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02353___ykuE
# 2: BSU14050___ykuE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     858/861 (99.7%)
# Similarity:   858/861 (99.7%)
# Gaps:           0/861 ( 0.0%)
# Score: 4278.0
# 
#
#=======================================

BSNT_02353___      1 ATGAAAAAGATGTCCAGAAGACAATTTCTAAAAGGAATGTTCGGCGCTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk      1 ATGAAAAAGATGTCCAGAAGACAATTTCTAAAAGGAATGTTCGGCGCTCT     50

BSNT_02353___     51 TGCTGCCGGGGCTTTAACGGCCGGCGGGGGATATGGCTATGCCAGGTATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk     51 TGCTGCCGGGGCTTTAACGGCCGGCGGGGGATATGGCTATGCCAGGTATC    100

BSNT_02353___    101 TCGAGCCGCATATGATCGAGACAACCGAACACACAATAAAAAGCTCTCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    101 TCGAGCCGCATATGATCGAGACAACCGAACACACAATAAAAAGCTCTCTC    150

BSNT_02353___    151 ATCCCGCACGGATTTGACGGTTTTAAAATCGTGCAGTTCAGCGATGCACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    151 ATCCCGCACGGATTTGACGGTTTTAAAATCGTGCAGTTCAGCGATGCACA    200

BSNT_02353___    201 CTTGAGTGATTACTTTACTCTCGAAGATTTAAAAACTGTCATTCTTACAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    201 CTTGAGTGATTACTTTACTCTCGAAGATTTAAAAACTGTCATTCTTACAA    250

BSNT_02353___    251 TTAATGAATCTAAACCTGATCTCATTGTTTTTACAGGTGATATTATCGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU14050___yk    251 TTAATGAATCTAAACCTGATCTCATTGTTTTTACAGGTGATATTATTGAT    300

BSNT_02353___    301 AATCCTGATACGTACCAGCACCACCAGGCAGTCATTCCATTATTGAGAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    301 AATCCTGATACGTACCAGCACCACCAGGCAGTCATTCCATTATTGAGAAA    350

BSNT_02353___    351 GCTTAATGCTCCCTTCGGCAAGCTTTGTATTTACGGCAATCATGATCACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    351 GCTTAATGCTCCCTTCGGCAAGCTTTGTATTTACGGCAATCATGATCACG    400

BSNT_02353___    401 GAGGCTATGGAACTGCCGTTTACAAAAGCCTGATGACGGCCGGAGGTTTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    401 GAGGCTATGGAACTGCCGTTTACAAAAGCCTGATGACGGCCGGAGGTTTC    450

BSNT_02353___    451 ACGGTATATCGCAATGGCTATCAAACATTGTCACTCGCAGATGGCAGCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    451 ACGGTATATCGCAATGGCTATCAAACATTGTCACTCGCAGATGGCAGCAA    500

BSNT_02353___    501 AATCGAGATTGCTTCGCTTGATGACTTAATGCTGGGAAACCCAGATTATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    501 AATCGAGATTGCTTCGCTTGATGACTTAATGCTGGGAAACCCAGATTATG    550

BSNT_02353___    551 AAGGCACCCTTTCAAGGCTGAGCGACAGACTTTTTTCCATTCTTCTCGTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    551 AAGGCACCCTTTCAAGGCTGAGCGACAGACTTTTTTCCATTCTTCTCGTC    600

BSNT_02353___    601 CATGAACCTGATGCGGCCTTGAAAACAACAGATTATCCCGTGAACCTTCA    650
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU14050___yk    601 CATGAACCTGATGCAGCCTTGAAAACAACAGATTATCCCGTGAACCTTCA    650

BSNT_02353___    651 GCTTTCCGGCCATACACACGGCGGCCAGATTCAGCTGCCTTTTTACGGAC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    651 GCTTTCCGGCCATACACACGGCGGCCAGATTCAGCTGCCTTTTTACGGAC    700

BSNT_02353___    701 CGATTATTACGCCTCCATATGGAAAAGTCTACACAGAGGGAATGTATCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    701 CGATTATTACGCCTCCATATGGAAAAGTCTACACAGAGGGAATGTATCAA    750

BSNT_02353___    751 ACGGGCAGCACTCATATTTACGTAAACCGAGGCCTCGGGATGACCAGGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14050___yk    751 ACGGGCAGCACTCATATTTACGTAAACCGAGGCCTCGGGATGACCAGGCT    800

BSNT_02353___    801 GCCTTTGCGGTTTCTGGCCAAGCCTGAAATCACTGTCTTCACCTTAAAAA    850
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU14050___yk    801 GCCTTTGCGGTTTCTTGCCAAGCCTGAAATCACTGTCTTCACCTTAAAAA    850

BSNT_02353___    851 GCACAAATTAA    861
                     |||||||||||
BSU14050___yk    851 GCACAAATTAA    861


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