Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02357 and BSU14100

See Amino acid alignment / Visit BSNT_02357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:04
# Commandline: needle
#    -asequence dna-align/BSNT_02357___ykuJ.1.22522.seq
#    -bsequence dna-align/BSU14100___ykuJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02357___ykuJ-BSU14100___ykuJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02357___ykuJ-BSU14100___ykuJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02357___ykuJ
# 2: BSU14100___ykuJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     239/240 (99.6%)
# Similarity:   239/240 (99.6%)
# Gaps:           0/240 ( 0.0%)
# Score: 1191.0
# 
#
#=======================================

BSNT_02357___      1 ATGTCACAATTAATGGGTATCATCACACGGCTGCAAAGTCTGCAAGAAAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14100___yk      1 ATGTCACAATTAATGGGTATCATCACACGGCTGCAAAGTCTGCAAGAAAC     50

BSNT_02357___     51 AGCGGAAGCGGCTAACGAGCCAATGCAGCGCTATTTCGAAGTGAATGGTG    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU14100___yk     51 AGCGGAAGCGGCTAACGAGCCAATGCAGCGTTATTTCGAAGTGAATGGTG    100

BSNT_02357___    101 AGAAAATATGCAGTGTTAAATATTTCGAAAAAAATCAAACGTTTGAACTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14100___yk    101 AGAAAATATGCAGTGTTAAATATTTCGAAAAAAATCAAACGTTTGAACTG    150

BSNT_02357___    151 ACGGTTTTCCAAAAGGGTGAAAAACCTAACACATATCCGTTTGATAATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14100___yk    151 ACGGTTTTCCAAAAGGGTGAAAAACCTAACACATATCCGTTTGATAATAT    200

BSNT_02357___    201 CGACATGGTTTCCATCGAAATCTTTGAACTTCTTCAGTAA    240
                     ||||||||||||||||||||||||||||||||||||||||
BSU14100___yk    201 CGACATGGTTTCCATCGAAATCTTTGAACTTCTTCAGTAA    240


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