Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02367 and BSU14190

See Amino acid alignment / Visit BSNT_02367 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:05
# Commandline: needle
#    -asequence dna-align/BSNT_02367___ykuR.1.22522.seq
#    -bsequence dna-align/BSU14190___dapL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02367___ykuR-BSU14190___dapL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02367___ykuR-BSU14190___dapL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02367___ykuR
# 2: BSU14190___dapL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1125
# Identity:    1117/1125 (99.3%)
# Similarity:  1117/1125 (99.3%)
# Gaps:           0/1125 ( 0.0%)
# Score: 5553.0
# 
#
#=======================================

BSNT_02367___      1 ATGAAGAAAGAGGAGCTCATCGCAATTCGCAGAGATCTGCATCGTATACC     50
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU14190___da      1 ATGAAGATAGAGGAGCTCATCGCAATTCGCAGAGATCTGCATCGTATACC     50

BSNT_02367___     51 GGAGCTTGGATTTCAGGAGTTCAAAACCCAGCAGTATTTATTACATGTCT    100
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU14190___da     51 GGAGCTTGGATTTCAGGAGTTCAAAACCCAGCAGTATTTATTAAATGTCT    100

BSNT_02367___    101 TGGAACAATATCCGCAAGACAGAATTGAAATTGAGAAATGGCGAACAGGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    101 TGGAACAATATCCGCAAGACAGAATTGAAATTGAGAAATGGCGAACAGGG    150

BSNT_02367___    151 CTTTTTGTAAAAGTGAACGGGACGGCGCCGGAAAAAATGCTGGCATACAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    151 CTTTTTGTAAAAGTGAACGGGACGGCGCCGGAAAAAATGCTGGCATACAG    200

BSNT_02367___    201 AGCGGATATCGATGCGCTTTCTATAGAAGAGCAAACTGGTCTTCCATTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    201 AGCGGATATCGATGCGCTTTCTATAGAAGAGCAAACTGGTCTTCCATTCG    250

BSNT_02367___    251 CATCAGAGCATCACGGCAACATGCACGCCTGCGGTCACGATTTGCATATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    251 CATCAGAGCATCACGGCAACATGCACGCCTGCGGTCACGATTTGCATATG    300

BSNT_02367___    301 ACAATTGCACTCGGCATTATTGATCATTTTGTTCACCACCCAGTCAAACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    301 ACAATTGCACTCGGCATTATTGATCATTTTGTTCACCACCCAGTCAAACA    350

BSNT_02367___    351 TGATTTGCTTTTTCTGTTTCAGCCGGCAGAGGAAGGGCCTGGCGGTGCGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    351 TGATTTGCTTTTTCTGTTTCAGCCGGCAGAGGAAGGGCCTGGCGGTGCGG    400

BSNT_02367___    401 AACCAATGCTTGAGAGCGATGTATTAAAAAAATGGCAGCCTGATTTCATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    401 AACCAATGCTTGAGAGCGATGTATTAAAAAAATGGCAGCCTGATTTCATC    450

BSNT_02367___    451 ACTGCCCTTCATATTGCTCCAGAGCTTCCGGTAGGCACCATTGCGACAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    451 ACTGCCCTTCATATTGCTCCAGAGCTTCCGGTAGGCACCATTGCGACAAA    500

BSNT_02367___    501 AAGCGGCCTTCTATTTGCGAATACATCAGAGCTAGTCATCGATCTGGAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    501 AAGCGGCCTTCTATTTGCGAATACATCAGAGCTAGTCATCGATCTGGAAG    550

BSNT_02367___    551 GCAAAGGGGGACATGCGGCATATCCGCATTTGGCTGAGGATATGGTTGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    551 GCAAAGGGGGACATGCGGCATATCCGCATTTGGCTGAGGATATGGTTGTA    600

BSNT_02367___    601 GCAGCAAGTACACTTGTCACCCAGCTGCAAACGATTATCTCTAGAAACAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    601 GCAGCAAGTACACTTGTCACCCAGCTGCAAACGATTATCTCTAGAAACAC    650

BSNT_02367___    651 AGATCCGCTAGACAGTGCTGTTATTACAGTTGGTACCATTACCGGAGGCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    651 AGATCCGCTAGACAGTGCTGTTATTACAGTTGGTACCATTACCGGAGGCT    700

BSNT_02367___    701 CGGCACAAAATATCATTGCGGAAACGGCCCACCTGGAAGGCACGATCCGC    750
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU14190___da    701 CGGCACAAAATATCATTGCAGAAACGGCCCACCTGGAAGGCACGATCCGC    750

BSNT_02367___    751 ACGCTTTCTGAAGAATCGATGAAACAAGTAAAGGAACGGATTGAAGATGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    751 ACGCTTTCTGAAGAATCGATGAAACAAGTAAAGGAACGGATTGAAGATGT    800

BSNT_02367___    801 AGTGAAAGGAATCGAAATCGGATTCCGCTGCAAAGGAAAAGTGACATATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    801 AGTGAAAGGAATCGAAATCGGATTCCGCTGCAAAGGAAAAGTGACATATC    850

BSNT_02367___    851 CGTCTGTCTATCACCAAGTTTACAATACGAGCGGATTAACAGAAGAATTT    900
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU14190___da    851 CGTCTGTATATCACCAAGTTTACAATACGAGCGGATTAACAGAAGAATTT    900

BSNT_02367___    901 ATGTCTTTTGTTGCTGAACATCAACTGGCGACTGTAATTGAAGCAAAAGA    950
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU14190___da    901 ATGTCTTTTGTTGCTGAACATCAACTGGCGACAGTAATTGAAGCAAAAGA    950

BSNT_02367___    951 AGCAATGACTGGGGAGGATTTTGGCTATATGCTGAAAAAATATCCCGGCT   1000
                     ||||||||||||.|||||||||||||||||||||||||||||||||||.|
BSU14190___da    951 AGCAATGACTGGAGAGGATTTTGGCTATATGCTGAAAAAATATCCCGGAT   1000

BSNT_02367___   1001 TCATGTTCTGGCTCGGCGCTGATTCTGAACATGGGCTTCATCATGCTAAG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14190___da   1001 TCATGTTCTGGCTCGGCGCTGATTCTGAACATGGGCTTCATCATGCTAAG   1050

BSNT_02367___   1051 CTGAATCCCGATGAAAATGCGATAGAAACAGCGGTTAATGTCATGACAGG   1100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU14190___da   1051 CTGAATCCCGATGAAAATGCGATAGAAACAGCGGTTCATGTCATGACAGG   1100

BSNT_02367___   1101 TTATTTTTCTGTTTATGCCAATTAA   1125
                     |||||||||||||||||||||||||
BSU14190___da   1101 TTATTTTTCTGTTTATGCCAATTAA   1125


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