Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02408 and BSU14440

See Amino acid alignment / Visit BSNT_02408 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:10
# Commandline: needle
#    -asequence dna-align/BSNT_02408___ykpB.1.22522.seq
#    -bsequence dna-align/BSU14440___ykpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02408___ykpB-BSU14440___ykpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02408___ykpB-BSU14440___ykpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02408___ykpB
# 2: BSU14440___ykpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     899/912 (98.6%)
# Similarity:   899/912 (98.6%)
# Gaps:           0/912 ( 0.0%)
# Score: 4443.0
# 
#
#=======================================

BSNT_02408___      1 ATGAAATTTTTGGTTGTCGGAGCAGGTGGAGTAGGTGGGTATATTGGCGG     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU14440___yk      1 ATGAAATTTTTGGTTGTCGGAGCAGGTGGAGTAGGCGGGTATATTGGCGG     50

BSNT_02408___     51 ACGGCTTTCGGAGAAAGGAAATGATGTGACATTTCTTGTGCGCCAAAAAC    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU14440___yk     51 ACGGCTTTCGGAGAAAGGAAATGATGTGACATTTCTCGTGCGCCAAAAAC    100

BSNT_02408___    101 GAGCTGAGCAGCTGAAAAAAACCGGGCTTGTCATCCATAGTGAAAAAGGG    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU14440___yk    101 GAGCTGAGCAGCTTAAAAAAACCGGGCTTGTCATCCATAGTGAAAAAGGG    150

BSNT_02408___    151 AATGTATCATTTCAGCCCGAACTAATCAGTGCCGGAGAAACAGGGCAATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    151 AATGTATCATTTCAGCCCGAACTAATCAGTGCCGGAGAAACAGGGCAATT    200

BSNT_02408___    201 TGATGTCGTTATCATTGCTTCTAAAGCATACTCGCTTGTTCAAGTGATAG    250
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU14440___yk    201 TGATGTCGTTATCATTGCTTCTAAAGCATACTCGCTTGGTCAAGTGATAG    250

BSNT_02408___    251 ACGATGTCAAACCATTTATCCATCAGGAATCTGTCATTCTCCCTTTTTTA    300
                     |.|||||||||||||||||||||||.||||||||||||.|||||||||||
BSU14440___yk    251 AGGATGTCAAACCATTTATCCATCAAGAATCTGTCATTATCCCTTTTTTA    300

BSNT_02408___    301 AATGGGTACCGCCACTATGAGCAGCTATTTGCGGCATTTTCAAAAGAACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    301 AATGGGTACCGCCACTATGAGCAGCTATTTGCGGCATTTTCAAAAGAACA    350

BSNT_02408___    351 GGTGCTGGGCGGCCTGTGTTTTATAGAAAGTGCTTTAGACAACAAAGGAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    351 GGTGCTGGGCGGCCTGTGTTTTATAGAAAGTGCTTTAGACAACAAAGGAG    400

BSNT_02408___    401 AAATTCATCATACGAGCGCATCGCATCGTTTTGTATTTGGAGAATGGAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    401 AAATTCATCATACGAGCGCATCGCATCGTTTTGTATTTGGAGAATGGAAC    450

BSNT_02408___    451 GGCGAGCGTACGGAGCGGATAAGAGCGTTTGAAGAGGCATTTTCAGGTGT    500
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU14440___yk    451 GGCGAGCGTACGGAGCGGATAAGAGCGCTTGAAGAGGCATTTTCAGGTGT    500

BSNT_02408___    501 GAAGGCTGAAGTCATCATTAGCGGGCATATCGAGAAGGACATTTGGAAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    501 GAAGGCTGAAGTCATCATTAGCGGGCATATCGAGAAGGACATTTGGAAAA    550

BSNT_02408___    551 AGTATCTCTTTATTGCAGCGCAAGCGGGGATCACAACGTTATTTCAACGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    551 AGTATCTCTTTATTGCAGCGCAAGCGGGGATCACAACGTTATTTCAACGA    600

BSNT_02408___    601 CCGCTTGGCCCAATCCTCGCCACAGAAGCCGGACGTCACACGGCCCAAAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    601 CCGCTTGGCCCAATCCTCGCCACAGAAGCCGGACGTCACACGGCCCAAAC    650

BSNT_02408___    651 TCTTATTGGGGAAATTTGCGCTGTTTTACGAAAAGAAGGTGTTCCGGCTG    700
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU14440___yk    651 TCTTATTGGGGAAATTTGCACTGTTTTACGAAAAGAAGGTGTTCCGGCTG    700

BSNT_02408___    701 ATCCGGATCTTGAGGAAGAGAGCTTTCGTACGATGACCAGCATGTCTTAT    750
                     ||||||.||||||||||||||||||||||||||||||||||||||||||.
BSU14440___yk    701 ATCCGGCTCTTGAGGAAGAGAGCTTTCGTACGATGACCAGCATGTCTTAC    750

BSNT_02408___    751 CATATGAAGTCCTCCATGCTTCGGGATATGGAAAACGGCCAAACGACAGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    751 CATATGAAGTCCTCCATGCTTCGGGATATGGAAAACGGCCAAACGACAGA    800

BSNT_02408___    801 AGGCGACCACCTGCATGGATTTTTGCTTGAAAAAGCTAAACGTTTATCTC    850
                     |||||||||||||||||||||||||.||||||||||.|||||||||||||
BSU14440___yk    801 AGGCGACCACCTGCATGGATTTTTGATTGAAAAAGCAAAACGTTTATCTC    850

BSNT_02408___    851 TCGCTGCACCAGTATTAGAAACCGTTTATGCGAATCTGCAAATGTATGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    851 TCGCTGCACCAGTATTAGAAACCGTTTATGCGAATCTGCAAATGTATGAA    900

BSNT_02408___    901 GCAGAAAAATAA    912
                     ||||||||||||
BSU14440___yk    901 GCAGAAAAATAA    912


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