Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02409 and BSU14450

See Amino acid alignment / Visit BSNT_02409 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:10
# Commandline: needle
#    -asequence dna-align/BSNT_02409___ampS.1.22522.seq
#    -bsequence dna-align/BSU14450___ampS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02409___ampS-BSU14450___ampS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02409___ampS-BSU14450___ampS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02409___ampS
# 2: BSU14450___ampS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity:    1227/1233 (99.5%)
# Similarity:  1227/1233 (99.5%)
# Gaps:           0/1233 ( 0.0%)
# Score: 6111.0
# 
#
#=======================================

BSNT_02409___      1 ATGGATTCATTTTCACAGAAATTAAATACATATGCACAGCTGGCGGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am      1 ATGGATTCATTTTCACAGAAATTAAATACATATGCACAGCTGGCGGTAGA     50

BSNT_02409___     51 AGTCGGCGTTAATGTCCAAAAAGGCCAGTATGTAGTCGTAAATGCTTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am     51 AGTCGGCGTTAATGTCCAAAAAGGCCAGTATGTAGTCGTAAATGCTTCAA    100

BSNT_02409___    101 CAGACGTTCGGGATTTTGTCCGTTTAATTGTAAAACACGCATATGAAAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    101 CAGACGTTCGGGATTTTGTCCGTTTAATTGTAAAACACGCATATGAAAAG    150

BSNT_02409___    151 GGCGCAAAAAACGTCACCGTGAATTGGCAGGATGACGAAGTCGCCAAATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    151 GGCGCAAAAAACGTCACCGTGAATTGGCAGGATGACGAAGTCGCCAAATT    200

BSNT_02409___    201 AAAATACGAACTTGCGCCGTTTGAAGCATTTGAAGAATATCCTGAATGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    201 AAAATACGAACTTGCGCCGTTTGAAGCATTTGAAGAATATCCTGAATGGG    250

BSNT_02409___    251 AAGCAAAAGGCAGAGAAGAGCTTGCCAAAAATGGAGCTGCTTTCATTTCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    251 AAGCAAAAGGCAGAGAAGAGCTTGCCAAAAATGGAGCTGCTTTCATTTCT    300

BSNT_02409___    301 GTTGTGTCGTCAAACCCAGACTTGCTAAAAGGTATAGATTCCAAACGGAT    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU14450___am    301 GTTGTGTCGTCGAACCCAGACTTGCTAAAAGGTATAGATTCCAAACGGAT    350

BSNT_02409___    351 TGCGGCATTCCAAAAAGCAGCAGGCAAAGCATTACATACATACAGACAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    351 TGCGGCATTCCAAAAAGCAGCAGGCAAAGCATTACATACATACAGACAAT    400

BSNT_02409___    401 ATATTCAATCAGACAAAGTCAGCTGGACTGTCGTAGGTGCGGCATCAGCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    401 ATATTCAATCAGACAAAGTCAGCTGGACTGTCGTAGGTGCGGCATCAGCA    450

BSNT_02409___    451 GGCTGGGCTCACAAGGTGTTTCCTGGCAAATCAGAGGAGGAAGCGATCCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    451 GGCTGGGCTCACAAGGTGTTTCCTGGCAAATCAGAGGAGGAAGCGATCCA    500

BSNT_02409___    501 CCTTCTGTGGGAAGAAATTTTTAAAGCGACGCGCGTAAATGAAGACAACC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    501 CCTTCTGTGGGAAGAAATTTTTAAAGCGACGCGCGTAAATGAAGACAACC    550

BSNT_02409___    551 CGGTTCAGGCGTGGATCAATCATGACCAAAATCTTCATGAAAAAGTTGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    551 CGGTTCAGGCGTGGATCAATCATGACCAAAATCTTCATGAAAAAGTTGAC    600

BSNT_02409___    601 CATTTGAACGAGAGACATTACGCTGCCTTACATTATCAAGCTGAAGGAAC    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU14450___am    601 CATTTGAACGAGAGACATTACGCTGCCTTACATTATCAAGCAGAAGGAAC    650

BSNT_02409___    651 TGATTTAACAATTAAGCTGCCTAGGAAGCATGTTTGGGCAGGTGCGGGAA    700
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    651 TGATCTAACAATTAAGCTGCCTAGGAAGCATGTTTGGGCAGGTGCGGGAA    700

BSNT_02409___    701 GCGTGAATGAAAGCGGCCATGAGTTTATGGCCAATATGCCGACAGAAGAA    750
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU14450___am    701 GCGTGAATGAAAGTGGCCATGAGTTTATGGCCAATATGCCGACAGAAGAA    750

BSNT_02409___    751 GTGTTCACGCTGCCGCAAAAAGACGGGGTTGACGGTGTGGTATCAAGCAC    800
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU14450___am    751 GTGTTCACGCTGCCGCAAAAAGACGGGGTTGACGGAGTGGTATCAAGCAC    800

BSNT_02409___    801 AAAACCATTAAGCTACGGCGGAAATATTATTGAAAATTTCACCCTGACGT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    801 AAAACCATTAAGCTACGGCGGAAATATTATTGAAAATTTCACCCTGACGT    850

BSNT_02409___    851 TTGAAAATGGCCGTATAGTCGACATTAAAGCTGAAAAAGGTGAGGATATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    851 TTGAAAATGGCCGTATAGTCGACATTAAAGCTGAAAAAGGTGAGGATATT    900

BSNT_02409___    901 TTAAAAGAACTGGTGGAAACAGATGAAGGTTCTCACTATTTAGGTGAAGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    901 TTAAAAGAACTGGTGGAAACAGATGAAGGTTCTCACTATTTAGGTGAAGT    950

BSNT_02409___    951 GGCACTTGTTCCTTACGATTCGCCTATATCACAATCAAACATTCTTTTCT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am    951 GGCACTTGTTCCTTACGATTCGCCTATATCACAATCAAACATTCTTTTCT   1000

BSNT_02409___   1001 ATAACACGCTGTTTGATGAAAACGCGTCAAATCATTTGGCGATCGGAAGC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am   1001 ATAACACGCTGTTTGATGAAAACGCGTCAAATCATTTGGCGATCGGAAGC   1050

BSNT_02409___   1051 GCCTATGCCTTTAATATTGAAGGCGGAAAGCAGATGTCTCGTGAAGAGCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am   1051 GCCTATGCCTTTAATATTGAAGGCGGAAAGCAGATGTCTCGTGAAGAGCT   1100

BSNT_02409___   1101 TGTCAAAGAAGGCCTAAATGAGAGCATTACACACGTGGACTTTATGATCG   1150
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU14450___am   1101 TGTCAAAGAAGGCCTAAATGAAAGCATTACACACGTGGACTTTATGATCG   1150

BSNT_02409___   1151 GTTCTAAGGATATGAATATTGACGGAATTACGGCAGACGGGAAAAGAGAG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14450___am   1151 GTTCTAAGGATATGAATATTGACGGAATTACGGCAGACGGGAAAAGAGAG   1200

BSNT_02409___   1201 CCTATCTTCAGAAACGGAAATTGGGCTTTTTAA   1233
                     |||||||||||||||||||||||||||||||||
BSU14450___am   1201 CCTATCTTCAGAAACGGAAATTGGGCTTTTTAA   1233


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.