Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02443 and BSU14680

See Amino acid alignment / Visit BSNT_02443 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:14
# Commandline: needle
#    -asequence dna-align/BSNT_02443___ykzC.1.22522.seq
#    -bsequence dna-align/BSU14680___ykzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02443___ykzC-BSU14680___ykzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02443___ykzC-BSU14680___ykzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02443___ykzC
# 2: BSU14680___ykzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity:     419/468 (89.5%)
# Similarity:   419/468 (89.5%)
# Gaps:          39/468 ( 8.3%)
# Score: 2055.0
# 
#
#=======================================

BSNT_02443___      1 ATGCTGGGAAGTAGGCCATTTGAGCAGGATGATCTCAGCTTGTTAGAAAA     50
                                                            |||||||||||
BSU14680___yk      1 ---------------------------------------TTGTTAGAAAA     11

BSNT_02443___     51 GCTCGCGGAGGCTCATCCTGTATGGAAAGAGGAGGAGTTTGGAGATAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk     12 GCTCGCGGAGGCTCATCCTGTATGGAAAGAGGAGGAGTTTGGAGATAAAG     61

BSNT_02443___    101 ATGCACAAGACTATATCATCTCCTATTCCATGTACAACGGGGTATGGCTT    150
                     |||||.|||||||||||||.|||||.||||||||||||||...|||||||
BSU14680___yk     62 ATGCAGAAGACTATATCATTTCCTACTCCATGTACAACGGTTCATGGCTT    111

BSNT_02443___    151 GTATGGGAAAAAGACGGTCTGCCTGTTGCCGTCAGCTACCATCTCGAGTG    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU14680___yk    112 GTATGGGAAAAAGACGGTATGCCTGTTGCCGTCAGCTACCATCTCGAGTG    161

BSNT_02443___    201 GTCTCCTTCAAACGGTAAGCCGTGGCTCGGAACGGTCCTGATTGACCCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk    162 GTCTCCTTCAAACGGTAAGCCGTGGCTCGGAACGGTCCTGATTGACCCGG    211

BSNT_02443___    251 CTGAAGAAAAAAAGGGACATGCGAAGATGATCATTGAACAGATCAGCAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk    212 CTGAAGAAAAAAAGGGACATGCGAAGATGATCATTGAACAGATCAGCAAA    261

BSNT_02443___    301 TTGCTTAGAGCCAAACACAAAGCGATGTTTGCGGGAGTTCCCATTGAGCG    350
                     |||||||||||.|||||.||||||||||||||||||||||||||||||||
BSU14680___yk    262 TTGCTTAGAGCGAAACATAAAGCGATGTTTGCGGGAGTTCCCATTGAGCG    311

BSNT_02443___    351 CAGTGAATGGATACTGTTTTTAAGCCAATGCGGCTTTGAACAGCTGAAAA    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk    312 CAGGGAATGGATACTGTTTTTAAGCCAATGCGGCTTTGAACAGCTGAAAA    361

BSNT_02443___    401 CGGAAAAAGATGAGAAAGGCAAATCATTTATGATCTTGGTGAAGCCTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk    362 CGGAAAAAGATGAGAAAGGCAAATCATTTATGATCTTGGTGAAGCCTTTA    411

BSNT_02443___    451 GCAGAAGCTGCCGTATGA    468
                     ||||||||||||||||||
BSU14680___yk    412 GCAGAAGCTGCCGTATGA    429


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