Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02448 and BSU14690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:15
# Commandline: needle
# -asequence dna-align/BSNT_02448___yktD.1.22522.seq
# -bsequence dna-align/BSU14690___yktD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02448___yktD-BSU14690___yktD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02448___yktD-BSU14690___yktD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02448___yktD
# 2: BSU14690___yktD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity: 898/921 (97.5%)
# Similarity: 898/921 (97.5%)
# Gaps: 6/921 ( 0.7%)
# Score: 4409.5
#
#
#=======================================
BSNT_02448___ 1 ATGAGGAAAAATGAGTCCAGCTTAACGTCTCTAATTTCAGCTTTTGCCCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 1 ATGAGGAAAAATGAGTCCAGCTTAACGTCTCTAATTTCAGCTTTTGCCCG 50
BSNT_02448___ 51 TGCATATCACAGCCGATATGACACACCTCTTATTTTTGATGATTTTATCG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 51 TGCATATCACAGCCGATATGACACACCTCTTATTTTTGATGATTTTATCG 100
BSNT_02448___ 101 CAAAAGATCTCATTAACGAAAAAGAGTTTATCGACATCAGTAAAAATATG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 101 CAAAAGATCTCATTAACGAAAAAGAGTTTATCGACATCAGTAAAAATATG 150
BSNT_02448___ 151 ATTCAAGGAATATCGTTTTTCAACAAAGAGATCGCCGAACGTCTTCAAAA 200
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 151 ATTCAAGAAATATCGTTTTTCAACAAAGAGATCGCCGAACGTCTTCAAAA 200
BSNT_02448___ 201 TGATCCTGAAAAAATATTAAAATGGGTTGCACAAATCCAGCTGTCTCCCA 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU14690___yk 201 TGATCCTGAAAAAATATTAAAATGGGTTGCACAAATCCAGCTGTCTCCAA 250
BSNT_02448___ 251 CGCCCCTAGCACGTGCTTCTTATTGTGAAAAAGTCTTGCACAACGAATTA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 251 CGCCCCTAGCACGTGCTTCTTATTGTGAAAAAGTCTTGCACAACGAATTA 300
BSNT_02448___ 301 ATGCTGGGAGCAAAACAGTATGTCATTCTTGGAGCGGGGCTGGATACTTT 350
||.|||||.|||||||||||||||||||||||||||||.|||||||||||
BSU14690___yk 301 ATCCTGGGGGCAAAACAGTATGTCATTCTTGGAGCGGGACTGGATACTTT 350
BSNT_02448___ 351 CTGCTTTCGGCATCCAGAATTAGAAAACAGCTTACAGGTTTTCGAGGTTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 351 CTGCTTTCGGCATCCAGAATTAGAAAACAGCTTACAGGTTTTCGAGGTTG 400
BSNT_02448___ 401 ACCATCCGGCTACACAGCAATTCAAAAAAAATAAGCTGAAGGATGCAAAT 450
|.||||||||.|||||||||||.|||||||||||||||||||||||||||
BSU14690___yk 401 ATCATCCGGCCACACAGCAATTGAAAAAAAATAAGCTGAAGGATGCAAAT 450
BSNT_02448___ 451 CTGACAATTCCGGGTCATCTTCATTTTGTTCCTATGGATTTCACCAAAAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 451 CTGACAATTCCGGGTCATCTTCATTTTGTTCCTATGGATTTCACCAAAAC 500
BSNT_02448___ 501 GTTTTCATATGATCCTCTTTTAGATGAAGGATTTAAGAACACAAAAACAT 550
||||||.|||||||||||.|||||||||||||||||.|||||||||||||
BSU14690___yk 501 GTTTTCGTATGATCCTCTCTTAGATGAAGGATTTAAAAACACAAAAACAT 550
BSNT_02448___ 551 TCTTCAGCCTTCTCGGAGTGTCTTATTATGTAACACAGGAAGAAAATGCA 600
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU14690___yk 551 TCTTCAGCCTTCTCGGAGTGTCTTATTATGTAACACGGGAAGAAAATGCA 600
BSNT_02448___ 601 AGCTTGATAAGCAATTTATTTTCTCATGTCCCGCCTGGAAGCTCTATTGT 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 601 AGCTTGATCAGCAATTTATTTTCTCATGTCCCGCCTGGAAGCTCTATTGT 650
BSNT_02448___ 651 TTTTGATTATGCGGACGAAACACTTTTTACAGCAAAAGGGACGTCGAATC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 651 TTTTGATTATGCGGACGAAACACTTTTTACAGCAAAAGGGACGTCGAATC 700
BSNT_02448___ 701 GAGTTGAACATATGGTGAAGATGGCTGCCGCAAGCGGGGAACCGATGAAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 701 GAGTTGAACATATGGTGAAGATGGCTGCCGCAAGCGGGGAACCGATGAAA 750
BSNT_02448___ 751 TCATGTTTCACTTATCAAGAGATTGAACATCTGTTAGAGTCATCTGGTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 751 TCATGTTTCACTTATCAAGAGATTGAACATCTGTTAGAGTCATCTGGTTT 800
BSNT_02448___ 801 ACTGATCTATGAACATCTATCACCAGACGACATCAATGACCTTTTCTTTA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 801 ACTGATCTATGAACATCTATCACCAGACGACATCAATGACCTTTTCTTTA 850
BSNT_02448___ 851 GTAATCGAAAAGACAATTTGTCAGCGTTTGAAACGATTCATTATATTCAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14690___yk 851 GTAATCGAAAAGACAATTTGTCAGCGTTTGAAACGATTCATTATATTCAT 900
BSNT_02448___ 901 GCGGTCACTAGTGTTGCATAA 921
|||||.|..| .||||
BSU14690___yk 901 GCGGTAAAAA------AATAA 915
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