Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02478 and BSU14920

See Amino acid alignment / Visit BSNT_02478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:20
# Commandline: needle
#    -asequence dna-align/BSNT_02478___ctaF.1.22522.seq
#    -bsequence dna-align/BSU14920___ctaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02478___ctaF-BSU14920___ctaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02478___ctaF-BSU14920___ctaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02478___ctaF
# 2: BSU14920___ctaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     330/333 (99.1%)
# Similarity:   330/333 (99.1%)
# Gaps:           0/333 ( 0.0%)
# Score: 1638.0
# 
#
#=======================================

BSNT_02478___      1 ATGGTCGATAAAAAAAGCAGAGGGCATATCAATAGCGACCTTGAATTTAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14920___ct      1 ATGGTCGATAAAAAAAGCAGAGGGCATATCAATAGCGACCTTGAATTTAA     50

BSNT_02478___     51 GAAAAAAAAGCATACCCGAGAGATGAAATATCAAGTCCTGTCTTTTGGTT    100
                     |||||||||||||.||||.|||||||||||||||||||||||||||||||
BSU14920___ct     51 GAAAAAAAAGCATGCCCGGGAGATGAAATATCAAGTCCTGTCTTTTGGTT    100

BSNT_02478___    101 TAATGATCGGTCTTACGATTGTTGCATTTCTGACTGTGGCCACGGACGGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14920___ct    101 TAATGATCGGTCTTACGATTGTTGCATTTCTGACTGTGGCCACGGACGGT    150

BSNT_02478___    151 GTCGGCAGCTGGTTTACGATTCCTTTCATTATTTTGCTAGCTGCAATTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14920___ct    151 GTCGGCAGCTGGTTTACGATTCCTTTCATTATTTTGCTAGCTGCAATTCA    200

BSNT_02478___    201 AGTCATCTTTCAGCTGTATTATTTCATGCATATGAATCAGAAAGGGCATG    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU14920___ct    201 AGTCATTTTTCAGCTGTATTATTTCATGCATATGAATCAGAAAGGGCATG    250

BSNT_02478___    251 AGGCGCCGGCACTGTTTTTGTATTCAGGGGTGTTTGTCGCGTTTATCACT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14920___ct    251 AGGCGCCGGCACTGTTTTTGTATTCAGGGGTGTTTGTCGCGTTTATCACT    300

BSNT_02478___    301 GTGCTTGCGTTTGTGACAATTATATGGTGGTAA    333
                     |||||||||||||||||||||||||||||||||
BSU14920___ct    301 GTGCTTGCGTTTGTGACAATTATATGGTGGTAA    333


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