Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02535 and BSU15350

See Amino acid alignment / Visit BSNT_02535 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:30
# Commandline: needle
#    -asequence dna-align/BSNT_02535___ylmB.1.22522.seq
#    -bsequence dna-align/BSU15350___ylmB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02535___ylmB-BSU15350___ylmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02535___ylmB-BSU15350___ylmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02535___ylmB
# 2: BSU15350___ylmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity:    1261/1353 (93.2%)
# Similarity:  1261/1353 (93.2%)
# Gaps:          72/1353 ( 5.3%)
# Score: 6225.0
# 
#
#=======================================

BSNT_02535___      1 TTGTTTTTATTAAGCCGTTTCATCACATTTGAAACGGCTTTTTTGATTTT     50
                                                                       
BSU15350___yl      0 --------------------------------------------------      0

BSNT_02535___     51 AAAGAATAGGAGCGGATTTACATTGGATCAACAAATAGACTCTTTGCAAA    100
                                           |||||||||||||||.||||||||||||
BSU15350___yl      1 ----------------------TTGGATCAACAAATATACTCTTTGCAAA     28

BSNT_02535___    101 AAAAAGTGGAAGAACAAAAGGAGGAGCTTATTCAGCTTGCTAAAACACTG    150
                     ||||||||||||||||.|||||||||||||||||||||||.|||||.|||
BSU15350___yl     29 AAAAAGTGGAAGAACATAAGGAGGAGCTTATTCAGCTTGCGAAAACGCTG     78

BSNT_02535___    151 ATTTCTTATCAAACACCCGCTCCGCCTGCAAGAAATACAGAGGGCATTCA    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU15350___yl     79 ATTTCTTATCAAACACCTGCTCCGCCTGCAAGAAATACAGAGGGCATTCA    128

BSNT_02535___    201 GTCATGGATTGCGGGATTTTTAAATGAATTGGGATTCTCGATCGACAAAT    250
                     |||.|||||||||||||.||||||||||||||||||||||||||||||||
BSU15350___yl    129 GTCTTGGATTGCGGGATATTTAAATGAATTGGGATTCTCGATCGACAAAT    178

BSNT_02535___    251 GGGATGTGTACCCTGGAGATCCCAATGTTGTCGGCAAGCTAAAGGGAACA    300
                     |||||||||||||||||||||||||||||||.||.||||||||.||||||
BSU15350___yl    179 GGGATGTGTACCCTGGAGATCCCAATGTTGTAGGGAAGCTAAAAGGAACA    228

BSNT_02535___    301 GATTCAGCAGATTATTATAGCCTGATTATCAATGGTCATGTAGATGTGGC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU15350___yl    229 GATTCAGCAGATTATTATAGCCTGATTATCAATGGCCATGTAGATGTGGC    278

BSNT_02535___    351 AGAGGTAAAAGAGGATGAAGAATGGAAGCACGATCCGTTTCATCCCATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    279 AGAGGTAAAAGAGGATGAAGAATGGAAGCACGATCCGTTTCATCCCATTG    328

BSNT_02535___    401 AAAAAAACGGTCTCTTAATCGGGCGAGGCGCTTCCGATATGAAGGGCGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    329 AAAAAAACGGTCTCTTAATCGGGCGAGGCGCTTCCGATATGAAGGGCGGA    378

BSNT_02535___    451 ATGGCTTGTGTGCTGTTTGCTGTCAAATTAATTCGTGAAGCCGGCATTGA    500
                     |||||||||||||||||||||||||||||||||||||||||..|||||||
BSU15350___yl    379 ATGGCTTGTGTGCTGTTTGCTGTCAAATTAATTCGTGAAGCAAGCATTGA    428

BSNT_02535___    501 GCTTCCAGGTGATCTGATTCTGCAATCGGTTATTGGGGAGGAAGTTGGAG    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    429 ACTTCCAGGTGATCTGATTCTGCAATCGGTTATTGGGGAGGAAGTTGGAG    478

BSNT_02535___    551 AGGCCGGCACACTTGAATGCTGCAAGAGGGGCTACCACGCTGATTTTGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    479 AGGCCGGCACACTTGAATGCTGCAAGAGGGGCTACCACGCTGATTTTGCA    528

BSNT_02535___    601 ATTGTCGCGGATACGAGCGATATGCATATTCAAGGCCAAGGGGGTGTCAT    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU15350___yl    529 ATTGTCGCGGATACGAGCGATATGCATATTCAAGGCCAAGGCGGTGTCAT    578

BSNT_02535___    651 TACAGGCTGGATCGAAATCAAAAGCAGTCAAACATTTCATGATGGAACGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    579 TACAGGCTGGATCGAAATCAAAAGCAGTCAAACATTTCATGATGGAACGA    628

BSNT_02535___    701 GACGGAATATGATTCACGCAGGCGGAGGAACATTCGGAGCAAGCGCAATT    750
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU15350___yl    629 GACGGAATATGATTCATGCAGGCGGAGGAACATTCGGAGCAAGCGCAATT    678

BSNT_02535___    751 GAAAAAATGGCAAAAATCATTGCGGGGCTCGGTGAACTTGAGCGCCACTG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    679 GAAAAAATGGCAAAAATCATTGCGGGGCTCGGTGAACTTGAGCGCCACTG    728

BSNT_02535___    801 GTCTATTATGAAAAGTTATCCCGGTTTTAAACCAGGCACAAATACGATTA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    729 GTCTATTATGAAAAGTTATCCCGGTTTTAAACCAGGCACAAATACGATTA    778

BSNT_02535___    851 ACCCGGCAGTTATAGAAGGCGGCAGACATGCGGCTTTTATAGCGGACGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    779 ACCCGGCAGTTATAGAAGGCGGCAGACATGCGGCTTTTATAGCGGACGAA    828

BSNT_02535___    901 TGCCGGCTGTGGATCACAGTCCATTTTTATCCGAATGAAACCCATGACCA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    829 TGCCGGCTGTGGATCACAGTCCATTTTTATCCGAATGAAACCCATGACCA    878

BSNT_02535___    951 AGTGGCAGCGGAAATAGAGGATTACGTCAATCGGCTGAGTGACAGTGATA   1000
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU15350___yl    879 AGTGGCAGCGGAAATAGAAGATTACGTCAATCGGCTGAGTGACAGTGATA    928

BSNT_02535___   1001 TTTGGCTTAGGGAAAACCGCCCTGTATTCAAGTGGGGAGGCTCATCTATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl    929 TTTGGCTTAGGGAAAACCGCCCTGTATTCAAGTGGGGAGGCTCATCTATG    978

BSNT_02535___   1051 ATTGAAGACAGAGGAGAAATTTTTCCGGCATTGGAAGTTGACCCTGGCCA   1100
                     ||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU15350___yl    979 ATAGAAGACAGGGGAGAAATTTTTCCGGCATTGGAAGTTGACCCTGGCCA   1028

BSNT_02535___   1101 CCCAGGCGTCTTAGTGCTAACTGCCTCTCATCAGAAAGTGAAACGGGAGT   1150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU15350___yl   1029 CCCAGGCGTCTTAGCGCTAACTGCCTCTCATCAGAAAGTGAAACGGGAGT   1078

BSNT_02535___   1151 GTCCAATTATTGACGTTTCTCAATCAGTTACAGATGGCGGATGGCTGTAT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl   1079 GTCCAATTATTGACGTTTCTCAATCAGTTACAGATGGCGGATGGCTGTAT   1128

BSNT_02535___   1201 GATGCCGGTATTCCATGCGTAATATACGGTCCTGGAGATCTGCACAATGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl   1129 GATGCCGGTATTCCATGCGTAATATACGGTCCTGGAGATCTGCACAATGC   1178

BSNT_02535___   1251 ACACTCTGTGAACGAGAAGGTATCGATTGAGCAGCTAGTAGAGTATACAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl   1179 ACACTCTGTGAACGAGAAGGTATCGATTGAGCAGCTAGTAGAGTATACAA   1228

BSNT_02535___   1301 AAATTATACTCGATTTTATCATCAGCTGGTGCAGCCGGAAAAAAGAACAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl   1229 AAATTATACTCGATTTTATCATCAGCTGGTGCAGCCGGAAAAAAGAACAA   1278

BSNT_02535___   1351 TGA   1353
                     |||
BSU15350___yl   1279 TGA   1281


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