Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02598 and BSU15840

See Amino acid alignment / Visit BSNT_02598 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:41
# Commandline: needle
#    -asequence dna-align/BSNT_02598___yloV.1.22522.seq
#    -bsequence dna-align/BSU15840___yloV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02598___yloV-BSU15840___yloV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02598___yloV-BSU15840___yloV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02598___yloV
# 2: BSU15840___yloV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1662
# Identity:    1649/1662 (99.2%)
# Similarity:  1649/1662 (99.2%)
# Gaps:           0/1662 ( 0.0%)
# Score: 8193.0
# 
#
#=======================================

BSNT_02598___      1 TTGTCTATCAGAACATTAAACGGCAGAACCTTTGCCGAGATGATTCTTGC     50
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU15840___yl      1 TTGTCTATCAGAACATTAGACGGCAGAACCTTTGCCGAGATGATTCTTGC     50

BSNT_02598___     51 GGGAGCGCAGAATCTGTCTCAAAACGCCAGTGCAGTTGATGCACTGAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl     51 GGGAGCGCAGAATCTGTCTCAAAACGCCAGTGCAGTTGATGCACTGAACG    100

BSNT_02598___    101 TGTTTCCGGTGCCGGACGGTGATACGGGAACAAATATGAACCTGTCGATG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    101 TGTTCCCGGTGCCGGACGGTGATACGGGAACAAATATGAACCTGTCGATG    150

BSNT_02598___    151 ACTTCCGGAGCAAGAGAAGTTGAACAAATGGATACGGATGATATCGGGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    151 ACTTCCGGAGCAAGAGAAGTTGAACAAATGGATACGGATGATATCGGGAA    200

BSNT_02598___    201 GGTGGGTTCCGCGTTATCTAAAGGGCTGCTCATGGGAGCACGCGGAAATT    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    201 GGTGGGCTCCGCGTTATCTAAAGGGCTGCTCATGGGAGCACGCGGAAATT    250

BSNT_02598___    251 CAGGAGTTATCCTATCCCAATTGTTCCGCGGATTTAGCAAAAGCATTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU15840___yl    251 CAGGAGTTATCCTATCCCAATTGTTCCGCGGATTTAGCAAAAACATTGAA    300

BSNT_02598___    301 ACGAAAAAAGAAATTAATGCACTTGAGTTTGCCGCTGCGCTGCAAGCAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    301 ACGAAAAAAGAAATTAATGCACTTGAGTTTGCCGCTGCGCTGCAAGCAGG    350

BSNT_02598___    351 TGTAGACATGGCGTATAAAGCTGTCATGAAACCTGTAGAGGGCACCATTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    351 TGTAGACATGGCGTATAAAGCTGTCATGAAACCTGTAGAGGGCACCATTT    400

BSNT_02598___    401 TAACAGTTGCAAAAGACGCTGCAAAAAAAGCGATGATCTTAGCAGAAAAA    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU15840___yl    401 TAACAGTTGCAAAAGACGCTGCAAAAAAAGCAATGATCTTAGCAGAAAAA    450

BSNT_02598___    451 GAAACCGATATCACTGCGCTGATGATTGCAGTGACAGAAGAAGCAGAGGC    500
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU15840___yl    451 GAAACCGATATCACTGCGCTGATGACTGCAGTGACAGAAGAAGCAGAGGC    500

BSNT_02598___    501 GTCTTTAAACCGCACCCCTGAATTGCTACCTGTCCTAAAGGAAGTAGGAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    501 GTCTTTAAACCGCACCCCTGAATTGCTACCTGTCCTAAAGGAAGTAGGAG    550

BSNT_02598___    551 TTGTCGATAGCGGGGGCAAAGGCCTGCTCTGTGTGTATGAAGGTTTCCTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    551 TTGTCGATAGCGGGGGCAAAGGCCTGCTCTGTGTGTATGAAGGTTTCCTT    600

BSNT_02598___    601 GCTTCATTAAAAGGTGAAACTGTACCTCAGAAAGCAGTTCTTCCGTCACT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    601 GCTTCATTAAAAGGTGAAACTGTACCTCAGAAAGCAGTTCTTCCGTCACT    650

BSNT_02598___    651 TGACGACATGGTCAGCGCAGAGCATCACAAGAGCGCGCAAAGCATGATGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    651 TGACGACATGGTCAGCGCAGAGCATCACAAGAGCGCGCAAAGCATGATGA    700

BSNT_02598___    701 ATACCGAAGATATTGAATTTGGATTCTGTACCGAAGTGATGGTTAGGCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    701 ATACCGAAGATATTGAATTTGGATTCTGTACCGAAGTGATGGTTAGGCTT    750

BSNT_02598___    751 GATCAGACAAAAAGAGAGTTCGACGAAGGCACGTTCAGGCAAGACCTCAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    751 GATCAGACAAAAAGAGAGTTCGACGAAGGCACGTTCAGGCAAGACCTCAG    800

BSNT_02598___    801 CCAGTTCGGAGATTCTCTGCTTGTGATTGCGGATGAATCGCTGGCGAAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    801 CCAGTTCGGAGATTCTCTGCTTGTGATTGCGGATGAATCGCTGGCGAAGG    850

BSNT_02598___    851 TTCATATTCATGCTGAAGAGCCGGGAAACGTGTTAAACTACGCCCAGCAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    851 TTCATATTCATGCTGAAGAGCCGGGAAACGTGTTAAACTACGCCCAGCAT    900

BSNT_02598___    901 TACGGTGAATTGATCAAAATAAAAATAGAAAATATGAGAGAACAGCATAC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl    901 TACGGTGAATTGATCAAAATAAAAATAGAAAATATGAGAGAACAGCATAC    950

BSNT_02598___    951 CTCTATCATCAGTCAAGAAAGCAAACCTGCAGACAACGAAATACCGCCGG   1000
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU15840___yl    951 CTCTATCATCAGTCAAGAAAGCAAACCTGCAGACAACGAAACACCGCCGG   1000

BSNT_02598___   1001 CAAAGCAGCCGTATGGCATTGTGACTGTGGCGATGGGAGAAGGAATTTCA   1050
                     ||||.|||||||||||||||||||||||.||||||||||||||||||.||
BSU15840___yl   1001 CAAAACAGCCGTATGGCATTGTGACTGTAGCGATGGGAGAAGGAATTGCA   1050

BSNT_02598___   1051 GACCTATTCAAAAGCATTGGCGCTTCTGTTGTGATTGAAGGCGGCCAGAC   1100
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1051 GACCTATTTAAAAGCATTGGCGCTTCTGTTGTGATTGAAGGCGGCCAGAC   1100

BSNT_02598___   1101 CATGAACCCAAGCACTGAGGATATTGTTGATGCCGTGAAGTCTGTAAATG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1101 CATGAACCCAAGCACTGAGGATATTGTTGATGCCGTGAAGTCTGTAAATG   1150

BSNT_02598___   1151 CAGATACGGTATTTATCCTGCCTAACAACTCCAACATTATCATGGCTGCT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1151 CAGATACGGTATTTATCCTGCCTAACAACTCCAACATTATCATGGCTGCT   1200

BSNT_02598___   1201 AACCAAGCGGCCAGCGTAGTGGATGAACAGGTTTTTGTCATTCCTGCTAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1201 AACCAAGCGGCCAGCGTAGTGGATGAACAGGTTTTTGTCATTCCTGCTAA   1250

BSNT_02598___   1251 AACGGTTCCGCAAGGGATGTCAGCCCTGCTGGCTTTTAACCCGGATCAAG   1300
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU15840___yl   1251 AACGGTTCCGCAAGGGATGTCAGCTCTGCTGGCTTTTAACCCGGATCAAG   1300

BSNT_02598___   1301 AAGCTGAAGCGAACGAGGCCAATATGCTAAGCGCCATTCAGCAAGTAAAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1301 AAGCTGAAGCGAACGAGGCCAATATGCTAAGCGCCATTCAGCAAGTAAAA   1350

BSNT_02598___   1351 AGCGGACAGGTGACGTTCTCAGTCAGAGATACTCATATTGACGGTAAAGA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1351 AGCGGACAGGTGACGTTCTCAGTCAGAGATACTCATATTGACGGTAAAGA   1400

BSNT_02598___   1401 TATTAAAAAAGGCGACTTTATGGGCATTCTGAATGGAACGATTATCGGCA   1450
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1401 CATTAAAAAAGGCGACTTTATGGGCATTCTGAATGGAACGATTATCGGCA   1450

BSNT_02598___   1451 CTTCTGAAAATCAGCTGTCAGCCGCGAAAATGCTGCTGTCAGAAATGATC   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1451 CTTCTGAAAATCAGCTGTCAGCCGCGAAAATGCTGCTGTCAGAAATGATC   1500

BSNT_02598___   1501 GGAGAAGATGATGAAATCGTGACCATTCTATATGGTGAGGATGCGTCTCA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1501 GGAGAAGATGATGAAATCGTGACCATTCTATATGGTGAGGATGCGTCTCA   1550

BSNT_02598___   1551 GGAAGAAGCTGAGCAGCTTGAAGCGTTTCTCAGTGAAAAGTACGAGGAGA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1551 GGAAGAAGCTGAGCAGCTTGAAGCGTTTCTCAGTGAAAAGTACGAGGAGA   1600

BSNT_02598___   1601 TTGAGGTTGAGATCCACAATGGGAAACAGCCTCTGTATTCGTATATAGTT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15840___yl   1601 TTGAGGTTGAGATCCACAATGGGAAACAGCCTCTGTATTCGTATATAGTT   1650

BSNT_02598___   1651 TCAGCAGAATAG   1662
                     ||||||||||||
BSU15840___yl   1651 TCAGCAGAATAG   1662


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