Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02603 and BSU15880

See Amino acid alignment / Visit BSNT_02603 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:42
# Commandline: needle
#    -asequence dna-align/BSNT_02603___ylpC.1.22522.seq
#    -bsequence dna-align/BSU15880___ylpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02603___ylpC-BSU15880___ylpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02603___ylpC-BSU15880___ylpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: BSU15880___ylpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity:     564/567 (99.5%)
# Similarity:   564/567 (99.5%)
# Gaps:           0/567 ( 0.0%)
# Score: 2808.0
# 
#
#=======================================

BSNT_02603___      1 ATGAGAAGAAATAAGAGAGAACGCCAGGAATTACTTCAGCAGACGATTCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl      1 ATGAGAAGAAATAAGAGAGAACGCCAGGAATTACTTCAGCAGACGATTCA     50

BSNT_02603___     51 AGCAACCCCCTTTATTACAGATGAAGAATTAGCGGGTAAATTCGGGGTGA    100
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU15880___yl     51 AGCAACCCCCTTTATTACAGATGAAGAACTAGCGGGTAAATTCGGGGTGA    100

BSNT_02603___    101 GCATCCAGACGATACGTTTGGACCGCTTAGAGCTTTCCATACCTGAACTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    101 GCATCCAGACGATACGTTTGGACCGCTTAGAGCTTTCCATACCTGAACTG    150

BSNT_02603___    151 AGAGAAAGAATTAAGAACGTGGCAGAGAAAACACTTGAGGACGAAGTGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    151 AGAGAAAGAATTAAGAACGTGGCAGAGAAAACACTTGAGGACGAAGTGAA    200

BSNT_02603___    201 GTCTCTGTCACTTGATGAAGTTATCGGAGAAATTATTGACCTTGAGCTGG    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    201 GTCCCTGTCACTTGATGAAGTTATCGGAGAAATTATTGACCTTGAGCTGG    250

BSNT_02603___    251 ATGATCAGGCGATATCCATTTTAGAAATAAAACAGGAGCACGTGTTCAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    251 ATGATCAGGCGATATCCATTTTAGAAATAAAACAGGAGCACGTGTTCAGC    300

BSNT_02603___    301 CGGAATCAGATTGCGAGAGGACACCATTTATTTGCACAGGCGAATTCTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    301 CGGAATCAGATTGCGAGAGGACACCATTTATTTGCACAGGCGAATTCTTT    350

BSNT_02603___    351 GGCAGTTGCAGTCATTGATGACGAGCTGGCGCTGACTGCAAGTGCAGACA    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    351 GGCCGTTGCAGTCATTGATGACGAGCTGGCGCTGACTGCAAGTGCAGACA    400

BSNT_02603___    401 TCCGCTTTACAAGACAGGTAAAGCAGGGTGAACGTGTCGTAGCAAAAGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    401 TCCGCTTTACAAGACAGGTAAAGCAGGGTGAACGTGTCGTAGCAAAAGCG    450

BSNT_02603___    451 AAAGTGACGGCTGTCGAAAAAGAAAAAGGAAGAACGGTTGTCGAAGTGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    451 AAAGTGACGGCTGTCGAAAAAGAAAAAGGAAGAACGGTTGTCGAAGTGAA    500

BSNT_02603___    501 CAGCTACGTTGGCGAAGAAATTGTTTTTTCTGGACGCTTTGACATGTATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15880___yl    501 CAGCTACGTTGGCGAAGAAATTGTTTTTTCTGGACGCTTTGACATGTATC    550

BSNT_02603___    551 GTTCAAAACATTCATAA    567
                     |||||||||||||||||
BSU15880___yl    551 GTTCAAAACATTCATAA    567


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