Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02612 and BSU15970

See Amino acid alignment / Visit BSNT_02612 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:44
# Commandline: needle
#    -asequence dna-align/BSNT_02612___ylxM.1.22522.seq
#    -bsequence dna-align/BSU15970___ylxM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02612___ylxM-BSU15970___ylxM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02612___ylxM-BSU15970___ylxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02612___ylxM
# 2: BSU15970___ylxM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     333/333 (100.0%)
# Similarity:   333/333 (100.0%)
# Gaps:           0/333 ( 0.0%)
# Score: 1665.0
# 
#
#=======================================

BSNT_02612___      1 ATGTCACTCGAAAAGACAACGAGAATGAATTATCTGTTTGATTTTTATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl      1 ATGTCACTCGAAAAGACAACGAGAATGAATTATCTGTTTGATTTTTATCA     50

BSNT_02612___     51 GTCGTTGTTGACGTCAAAACAGAAGAGCTATATGTCGCTTTATTATTTGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl     51 GTCGTTGTTGACGTCAAAACAGAAGAGCTATATGTCGCTTTATTATTTGG    100

BSNT_02612___    101 ACGATTTCTCCCTAGGCGAAATAGCCGAAGAATATGAGGTTTCAAGACAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl    101 ACGATTTCTCCCTAGGCGAAATAGCCGAAGAATATGAGGTTTCAAGACAA    150

BSNT_02612___    151 GCTGTTTATGATAACATCAAACGAACAGAAGCAATGCTTGAACAATATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl    151 GCTGTTTATGATAACATCAAACGAACAGAAGCAATGCTTGAACAATATGA    200

BSNT_02612___    201 AGAAAAGCTGCTCCTTTTGAAAAAGTTTCAGGAGCGTAAAGAGATGTTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl    201 AGAAAAGCTGCTCCTTTTGAAAAAGTTTCAGGAGCGTAAAGAGATGTTTA    250

BSNT_02612___    251 ATAAGCTGAAGGAGCTTGCTTCCGGTTCAAAAGAAGAGGAAGAAATTACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15970___yl    251 ATAAGCTGAAGGAGCTTGCTTCCGGTTCAAAAGAAGAGGAAGAAATTACA    300

BSNT_02612___    301 GCTCTGATTGAAGCGCTTGAGAAATTAGATTAG    333
                     |||||||||||||||||||||||||||||||||
BSU15970___yl    301 GCTCTGATTGAAGCGCTTGAGAAATTAGATTAG    333


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.