Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02717 and BSU16740

See Amino acid alignment / Visit BSNT_02717 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence dna-align/BSNT_02717___spoVFB.1.22522.seq
#    -bsequence dna-align/BSU16740___spoVFB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02717___spoVFB-BSU16740___spoVFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02717___spoVFB-BSU16740___spoVFB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02717___spoVFB
# 2: BSU16740___spoVFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     598/603 (99.2%)
# Similarity:   598/603 (99.2%)
# Gaps:           0/603 ( 0.0%)
# Score: 2970.0
# 
#
#=======================================

BSNT_02717___      1 ATGTCGTCATTAAAAGGAAAAAGAATCGGGTTTGGGCTGACCGGGTCGCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp      1 ATGTCGTCATTAAAAGGAAAAAGAATCGGGTTTGGGCTGACCGGGTCGCA     50

BSNT_02717___     51 TTGCACATATGAAGCGGTTTTCCCGCAAATTGAGGCGTTGGTCAATGAAG    100
                     |||||||||||||||||||||||||||||||||||.|||||||||.||||
BSU16740___sp     51 TTGCACATATGAAGCGGTTTTCCCGCAAATTGAGGAGTTGGTCAACGAAG    100

BSNT_02717___    101 GAGCTGAAGTCCGTCCGGTTGTCACATTTAATGTAAAATCCACAAATACC    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU16740___sp    101 GAGCTGAAGTCCGTCCGGTTGTCACATTTAATGTAAAATCTACAAATACC    150

BSNT_02717___    151 CGATTTGGAGAGGGCGCAGAATGGGTTAAAAAAATTGAAGACCTGACTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    151 CGATTTGGAGAGGGCGCAGAATGGGTTAAAAAAATTGAAGACCTGACTGG    200

BSNT_02717___    201 ATATGAGGCCATTGATTCGATTGTAAAGGCAGAACCTCTTGGACCGAAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU16740___sp    201 ATATGAGGCCATTGATTCGATTGTAAAGGCAGAACCTCTTGGGCCGAAGC    250

BSNT_02717___    251 TGCCCCTTGACTGCATGGTCATTGCGCCTTTAACAGGCAATTCAATGAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    251 TGCCCCTTGACTGCATGGTCATTGCGCCTTTAACAGGCAATTCAATGAGC    300

BSNT_02717___    301 AAGCTGGCAAATGCCATGACGGACAGCCCGGTGCTGATGGCGGCAAAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    301 AAGCTGGCAAATGCCATGACGGACAGCCCGGTGCTGATGGCGGCAAAAGC    350

BSNT_02717___    351 GACAATCCGGAACAATCGGCCTGTCGTTCTGGGTATCTCGACAAATGATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    351 GACAATCCGGAACAATCGGCCTGTCGTTCTGGGTATCTCGACAAATGATG    400

BSNT_02717___    401 CTCTTGGTTTAAACGGAACAAATTTAATGAGGCTCATGTCAACAAAAAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    401 CTCTTGGTTTAAACGGAACAAATTTAATGAGGCTCATGTCAACAAAAAAT    450

BSNT_02717___    451 ATCTTTTTTATTCCATTCGGGCAAGATGATCCATTTAAAAAACCGAATTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    451 ATCTTTTTTATTCCATTCGGGCAAGATGATCCATTTAAAAAACCGAATTC    500

BSNT_02717___    501 AATGGTAGCCAAAATGGATCTGCTACCGCAAACGATTGAAAAGGCACTCA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU16740___sp    501 AATGGTAGCCAAAATGGATCTGCTTCCGCAAACGATTGAAAAGGCACTCA    550

BSNT_02717___    551 TGCACCAGCAGCTTCAGCCGATTCTAGTTGAGAATTATCAGGGAAATGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16740___sp    551 TGCACCAGCAGCTTCAGCCGATTCTAGTTGAGAATTATCAGGGAAATGAC    600

BSNT_02717___    601 TAA    603
                     |||
BSU16740___sp    601 TAA    603


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.