Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02740 and BSU16940

See Amino acid alignment / Visit BSNT_02740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:04
# Commandline: needle
#    -asequence dna-align/BSNT_02740___recA.1.22522.seq
#    -bsequence dna-align/BSU16940___recA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02740___recA-BSU16940___recA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02740___recA-BSU16940___recA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02740___recA
# 2: BSU16940___recA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1047
# Identity:    1041/1047 (99.4%)
# Similarity:  1041/1047 (99.4%)
# Gaps:           0/1047 ( 0.0%)
# Score: 5181.0
# 
#
#=======================================

BSNT_02740___      1 ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAACAAATAGAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re      1 ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAACAAATAGAAAA     50

BSNT_02740___     51 ACAGTTCGGCAAAGGTTCCATTATGAAACTGGGAGAAAAGACAGATACAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re     51 ACAGTTCGGCAAAGGTTCCATTATGAAACTGGGAGAAAAGACAGATACAA    100

BSNT_02740___    101 GAATTTCTACTGTCCCAAGCGGCTCCCTCGCTCTTGATACAGCACTGGGA    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU16940___re    101 GAATTTCTACTGTACCAAGCGGCTCCCTCGCTCTTGATACAGCACTGGGA    150

BSNT_02740___    151 ATTGGCGGATATCCTCGCGGACGGATTATTGAAGTATACGGTCCTGAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    151 ATTGGCGGATATCCTCGCGGACGGATTATTGAAGTATACGGTCCTGAAAG    200

BSNT_02740___    201 CTCAGGTAAAACAACTGTGGCGCTTCATGCGATTGCTGAAGTTCAGCAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    201 CTCAGGTAAAACAACTGTGGCGCTTCATGCGATTGCTGAAGTTCAGCAGC    250

BSNT_02740___    251 AGGGCGGACAAGCCGCGTTTATCGATGCGGAGCATGCGTTAGATCCGGTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    251 AGGGCGGACAAGCCGCGTTTATCGATGCGGAGCATGCGTTAGATCCGGTA    300

BSNT_02740___    301 TACGCGCAAAAGCTCGGTGTTAACATCGAGGAGCTTTTACTGTCTCAGCC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU16940___re    301 TACGCGCAAAAGCTCGGTGTTAACATCGAAGAGCTTTTACTGTCTCAGCC    350

BSNT_02740___    351 TGACACAGGCGAGCAGGCGCTTGAAATTGCGGAAGCATTGGTTCGAAGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    351 TGACACAGGCGAGCAGGCGCTTGAAATTGCGGAAGCATTGGTTCGAAGCG    400

BSNT_02740___    401 GGGCAGTTGACATTGTCGTTGTCGACTCTGTAGCCGCTCTCGTTCCGAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    401 GGGCAGTTGACATTGTCGTTGTCGACTCTGTAGCCGCTCTCGTTCCGAAA    450

BSNT_02740___    451 GCGGAAATTGAAGGCGACATGGGAGATTCTCATGTCGGTTTACAAGCACG    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU16940___re    451 GCGGAAATTGAAGGCGACATGGGAGATTCGCATGTCGGTTTACAAGCACG    500

BSNT_02740___    501 CTTAATGTCTCAAGCGCTTCGTAAGCTTTCAGGGGCCATTAACAAATCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    501 CTTAATGTCTCAAGCGCTTCGTAAGCTTTCAGGGGCCATTAACAAATCGA    550

BSNT_02740___    551 AGACAATCGCGATTTTCATTAACCAAATTCGTGAAAAAGTCGGCGTTATG    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16940___re    551 AGACAATCGCGATTTTCATTAACCAAATTCGTGAAAAAGTCGGTGTTATG    600

BSNT_02740___    601 TTCGGGAACCCGGAAACAACTCCTGGCGGCCGTGCGTTGAAATTCTACTC    650
                     ||||||||||||||||||||.||||||||||||||||||||||||||.||
BSU16940___re    601 TTCGGGAACCCGGAAACAACACCTGGCGGCCGTGCGTTGAAATTCTATTC    650

BSNT_02740___    651 TTCCGTGCGTCTTGAAGTGCGCCGTGCTGAACAGCTGAAACAAGGCAACG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    651 TTCCGTGCGTCTTGAAGTGCGCCGTGCTGAACAGCTGAAACAAGGCAACG    700

BSNT_02740___    701 ACGTAATGGGGAACAAAACGAAAATCAAAGTCGTGAAAAACAAGGTGGCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    701 ACGTAATGGGGAACAAAACGAAAATCAAAGTCGTGAAAAACAAGGTGGCT    750

BSNT_02740___    751 CCGCCGTTCCGTACAGCCGAGGTTGACATTATGTACGGAGAAGGCATTTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    751 CCGCCGTTCCGTACAGCCGAGGTTGACATTATGTACGGAGAAGGCATTTC    800

BSNT_02740___    801 AAAAGAAGGCGAAATCATTGATCTAGGAACTGAACTTGATATCGTGCAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    801 AAAAGAAGGCGAAATCATTGATCTAGGAACTGAACTTGATATCGTGCAAA    850

BSNT_02740___    851 AAAGCGGTTCATGGTACTCTTATGAAGAAGAGCGTCTTGGCCAAGGCCGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    851 AAAGCGGTTCATGGTACTCTTATGAAGAAGAGCGTCTTGGCCAAGGCCGT    900

BSNT_02740___    901 GAAAATGCAAAACAATTCCTGAAAGAAAATAAAGATATCATGCTGATGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    901 GAAAATGCAAAACAATTCCTGAAAGAAAATAAAGATATCATGCTGATGAT    950

BSNT_02740___    951 CCAGGAGCAAATTCGCGAACATTACGGCTTGGATAATAACGGAGTAGTGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re    951 CCAGGAGCAAATTCGCGAACATTACGGCTTGGATAATAACGGAGTAGTGC   1000

BSNT_02740___   1001 AGCAGCAAGCTGAAGAGACACAAGAAGAACTCGAATTTGAAGAATAA   1047
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU16940___re   1001 AGCAGCAAGCTGAAGAGACACAAGAAGAACTCGAATTTGAAGAATAA   1047


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