Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02743 and BSU16960

See Amino acid alignment / Visit BSNT_02743 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:04
# Commandline: needle
#    -asequence dna-align/BSNT_02743___ymdA.1.22522.seq
#    -bsequence dna-align/BSU16960___ymdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02743___ymdA-BSU16960___ymdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02743___ymdA-BSU16960___ymdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02743___ymdA
# 2: BSU16960___ymdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1563
# Identity:    1559/1563 (99.7%)
# Similarity:  1559/1563 (99.7%)
# Gaps:           0/1563 ( 0.0%)
# Score: 7779.0
# 
#
#=======================================

BSNT_02743___      1 ATGACCCCAATTATGATGGTTCTCATCTCCATTTTGCTGATTCTACTCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym      1 ATGACCCCAATTATGATGGTTCTCATCTCCATTTTGCTGATTCTACTCGG     50

BSNT_02743___     51 TTTAGTTGTTGGCTACTTTGTTCGTAAAACCATTGCCGAAGCGAAAATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym     51 TTTAGTTGTTGGCTACTTTGTTCGTAAAACCATTGCCGAAGCGAAAATTG    100

BSNT_02743___    101 CGGGCGCACGCGGTGCAGCCGAGCAAATTCTTGAAGATGCGAAGCGTGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    101 CGGGCGCACGCGGTGCAGCCGAGCAAATTCTTGAAGATGCGAAGCGTGAT    150

BSNT_02743___    151 GCTGAAGCACTGAAAAAAGAAGCTCTGCTTGAAGCAAAGGATGAAATCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    151 GCTGAAGCACTGAAAAAAGAAGCTCTGCTTGAAGCAAAGGATGAAATCCA    200

BSNT_02743___    201 CAAACTTCGAATAGATGCTGAACAGGAAGTTCGTGAAAGACGAAATGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    201 CAAACTTCGAATAGATGCTGAACAGGAAGTTCGTGAAAGACGAAATGAGC    250

BSNT_02743___    251 TTCAAAAACAAGAAAACCGTTTACTCCAAAAGGAGGAAAACCTTGATCGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    251 TTCAAAAACAAGAAAACCGTTTACTCCAAAAGGAGGAAAACCTTGATCGC    300

BSNT_02743___    301 AAACATGAGGGAATTGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    301 AAACATGAGGGAATTGATAAACGGGAAGCGATGTTGGAGAAGAAAGATCA    350

BSNT_02743___    351 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    351 TTCTCTGAATGAACGACAACAACATATTGAAGAGATGGAAAGCAAAGTGG    400

BSNT_02743___    401 ATGAGATGATTCGTATGCAGCAGTCTGAGTTGGAACGAATTTCGAGTCTA    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU16960___ym    401 ATGAGATGATTCGTATGCAGCAGTCTGAGTTGGAACGAATTTCGAGTCTG    450

BSNT_02743___    451 ACTCGTGACGAAGCGAAACAAATCATTCTTGAGCGGGTTGAAAACGAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    451 ACTCGTGACGAAGCGAAACAAATCATTCTTGAGCGGGTTGAAAACGAGCT    500

BSNT_02743___    501 TTCACATGACATCGCCATCATGACAAAAGAAACTGAAAACCGTGCGAAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    501 TTCACATGACATCGCCATCATGACAAAAGAAACTGAAAACCGTGCGAAAG    550

BSNT_02743___    551 AAGAGGCGGATAAGAAAGCGAAAAACATTCTTTCACTCGCCTTACAGCGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    551 AAGAGGCGGATAAGAAAGCGAAAAACATTCTTTCACTCGCCTTACAGCGC    600

BSNT_02743___    601 TGCGCAGCGGACCACGTTGCCGAAACAACGGTATCAGTTGTCAATCTTCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    601 TGCGCAGCGGACCACGTTGCCGAAACAACGGTATCAGTTGTCAATCTTCC    650

BSNT_02743___    651 AAATGATGAGATGAAAGGACGTATCATCGGACGGGAAGGGCGTAACATTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    651 AAATGATGAGATGAAAGGACGTATCATCGGACGGGAAGGGCGTAACATTC    700

BSNT_02743___    701 GTACGCTTGAAACGCTGACAGGAATTGACCTGATTATTGATGATACGCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    701 GTACGCTTGAAACGCTGACAGGAATTGACCTGATTATTGATGATACGCCT    750

BSNT_02743___    751 GAAGCTGTCATTCTTTCCGGATTTGATCCGATCAGACGTGAGACAGCCAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    751 GAAGCTGTCATTCTTTCCGGATTTGATCCGATCAGACGTGAGACAGCCAG    800

BSNT_02743___    801 AATTGCTCTTGATAAACTCGTTCAGGATGGCCGTATTCATCCGGCACGGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    801 AATTGCTCTTGATAAACTCGTTCAGGATGGCCGTATTCATCCGGCACGGA    850

BSNT_02743___    851 TTGAAGAAATGGTTGAAAAATCTCGCCGCGAGGTCGATGACTATATTCGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    851 TTGAAGAAATGGTTGAAAAATCTCGCCGCGAGGTCGATGACTATATTCGT    900

BSNT_02743___    901 GAGATGGGTGAGCAAACGACATTTGAGGTTGGCGTTCATGGCCTCCACCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    901 GAGATGGGTGAGCAAACGACATTTGAGGTTGGCGTTCATGGCCTCCACCC    950

BSNT_02743___    951 AGATCTCATCAAGATCCTCGGCCGCTTAAAGTTCCGTACAAGCTACGGTC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym    951 AGATCTCATCAAGATCCTCGGCCGCTTAAAGTTCCGTACAAGCTACGGTC   1000

BSNT_02743___   1001 AAAATGTGCTTAAGCATTCCATGGAAGTCGCATTCTTGGCCGGTCTAATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1001 AAAATGTGCTTAAGCATTCCATGGAAGTCGCATTCTTGGCCGGTCTAATG   1050

BSNT_02743___   1051 GCATCGGAGCTTGGTGAAGACGCAAAGCTTGCTAAACGTGCGGGTCTTCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1051 GCATCGGAGCTTGGTGAAGACGCAAAGCTTGCTAAACGTGCGGGTCTTCT   1100

BSNT_02743___   1101 TCACGACATCGGGAAAGCAATTGACCATGAAGTAGAAGGAAGCCACGTTG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1101 TCACGACATCGGGAAAGCAATTGACCATGAAGTAGAAGGAAGCCACGTTG   1150

BSNT_02743___   1151 AGATCGGGGTAGAGCTTGCGACCAAATATAAAGAGCACCCAGTCGTGATT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1151 AGATCGGGGTAGAGCTTGCGACCAAATATAAAGAGCACCCAGTCGTGATT   1200

BSNT_02743___   1201 AACAGTATTGCATCACACCACGGGGACGAGGAGCCGACTTCCATTATTGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1201 AACAGTATTGCATCACACCACGGGGACGAGGAGCCGACTTCCATTATTGC   1250

BSNT_02743___   1251 TGTGCTGGTAGCTGCAGCAGATGCGCTTTCCGCTGCAAGACCTGGCGCAA   1300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1251 TGTACTGGTAGCTGCAGCAGATGCGCTTTCCGCTGCAAGACCTGGCGCAA   1300

BSNT_02743___   1301 GAAGTGAGACGCTCGAGAATTATATTCGAAGACTTGAAAAACTCGAAGAA   1350
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16960___ym   1301 GAAGTGAGACGCTCGAGAATTATATTCGAAGACTTGAAAAACTTGAAGAA   1350

BSNT_02743___   1351 ATTTCTGAGTCCTACGAAGGTGTTGAAAAATCATTTGCCATTCAGGCTGG   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1351 ATTTCTGAGTCCTACGAAGGTGTTGAAAAATCATTTGCCATTCAGGCTGG   1400

BSNT_02743___   1401 ACGCGAAGTGCGTATTATGGTGAAGCCGGATTCAATTAATGATCTTGAGG   1450
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU16960___ym   1401 ACGCGAAGTGCGAATTATGGTGAAGCCGGATTCAATTAATGATCTTGAGG   1450

BSNT_02743___   1451 CTCATCGACTGGCGCGAGATATCCGCAAGCGAATTGAGGACGAGCTCGAT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1451 CTCATCGACTGGCGCGAGATATCCGCAAGCGAATTGAGGACGAGCTCGAT   1500

BSNT_02743___   1501 TATCCAGGTCATATTAAGGTGACAGTAATCAGAGAGACTCGAGCCGTAGA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16960___ym   1501 TATCCAGGTCATATTAAGGTGACAGTAATCAGAGAGACTCGAGCCGTAGA   1550

BSNT_02743___   1551 GTATGCAAAATAA   1563
                     |||||||||||||
BSU16960___ym   1551 GTATGCAAAATAA   1563


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