Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02771 and BSU17060

See Amino acid alignment / Visit BSNT_02771 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence dna-align/BSNT_02771___ymzD.1.22522.seq
#    -bsequence dna-align/BSU17060___ymzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02771___ymzD-BSU17060___ymzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02771___ymzD-BSU17060___ymzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02771___ymzD
# 2: BSU17060___ymzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     448/465 (96.3%)
# Similarity:   448/465 (96.3%)
# Gaps:           9/465 ( 1.9%)
# Score: 2208.0
# 
#
#=======================================

BSNT_02771___      1 GTGTCATACTTGAACCAAAAAGAACAGAACGAGCACTCTAAAGATTTTAA     50
                              .||||||||||||||||||||||||||||||||||||||||
BSU17060___ym      1 ---------ATGAACCAAAAAGAACAGAACGAGCACTCTAAAGATTTTAA     41

BSNT_02771___     51 CCTGAGATCAAAATTAATCGGAATTGTATCTATCACTTTTATCGCGGCCA    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU17060___ym     42 CCTGAGATCAAAATTAATCGGAATTGTATCTATTACTTTTATCGCGGCCA     91

BSNT_02771___    101 TTGCGCTTGCAGTCATCTTCGGCGGCTTTTTCTTCGGGATGAAAGGCTTA    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym     92 TCGCGCTTGCAGTCATCTTCGGCGGCTTTTTCTTCGGGATGAAAGGCTTA    141

BSNT_02771___    151 TTCTCCATACTTGGCATCACATACGCTTCCAATCAAACATTAGCTTTATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym    142 TTCTCCATACTTGGCATCACATACGCTTCCAATCAAACATTAGCTTTATT    191

BSNT_02771___    201 TATTTTAGCCTGCTTTGCTGTAGGTTTAATCATAGACCCACTCACAAAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym    192 TATTTTAGCCTGCTTTGCTGTAGGTTTAATCATAGACCCACTCACAAAGA    241

BSNT_02771___    251 TTCTCTCTATCATTTTGGCAAAATCACTTTCATTGAAAAAGACTGCACTT    300
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym    242 TTATCTCTATCATTTTGGCAAAATCACTTTCATTGAAAAAGACTGCACTT    291

BSNT_02771___    301 TTTGCTTTTATACTGTATTTTATCAGCAATCTTATAACGATCTGTTTTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17060___ym    292 TTTGCTTTTATACTGTATTTTATCAGCAATCTTATAACGATCTGTTTTGC    341

BSNT_02771___    351 AGATTACTTTATGGAGTCTATTTATATTCCAGATATCTTGCTTGTTGTGA    400
                     |||||||||||||.||||||||||||||||||||.|||||||||||||||
BSU17060___ym    342 AGATTACTTTATGCAGTCTATTTATATTCCAGATGTCTTGCTTGTTGTGA    391

BSNT_02771___    401 TATCAGCTTTCATGGCTTTCATTGAACTTACTTTTGATAACCAGCCTAAT    450
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU17060___ym    392 TATCAGCTTTCATGGCTATCATTGAACTTGCTTTTGATAACCAGCCTAAT    441

BSNT_02771___    451 AGAGAAGCAGCTTAA    465
                     |||||||||||||||
BSU17060___ym    442 AGAGAAGCAGCTTAA    456


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