Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02774 and BSU17080

See Amino acid alignment / Visit BSNT_02774 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence dna-align/BSNT_02774___pksA.1.22522.seq
#    -bsequence dna-align/BSU17080___pksA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02774___pksA-BSU17080___pksA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02774___pksA-BSU17080___pksA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02774___pksA
# 2: BSU17080___pksA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 620
# Identity:     600/620 (96.8%)
# Similarity:   600/620 (96.8%)
# Gaps:           7/620 ( 1.1%)
# Score: 2925.5
# 
#
#=======================================

BSNT_02774___      1 ATGCCAAAACAAATTGACCATGAGAAAAGAAGAAAACAAATTGCAGAAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk      1 ATGCCAAAACAAATTGACCATGAGAAAAGAAGAAAACAAATTGCAGAAGC     50

BSNT_02774___     51 AACGTGGCGCGTCATTTTAGAACGAGGGATGGAGGGAGCATCAGCCAGGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU17080___pk     51 AACGTGGCGCGTCATTTTAGAACGAGGGATGGAGGGAGCATCAGCCAGAA    100

BSNT_02774___    101 ACATTGCAAAGGAAGCAGGATTGTCATTAGGTGCACTGCGCCATTATTTC    150
                     |.||||||||||||||||||||||||||||||||.|||||||||||||||
BSU17080___pk    101 ATATTGCAAAGGAAGCAGGATTGTCATTAGGTGCGCTGCGCCATTATTTC    150

BSNT_02774___    151 TCTACACAGGATGAATTGCTTGCTTTTGCAATGAAACTTGTCCAAGAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    151 TCTACACAGGATGAATTGCTTGCTTTTGCAATGAAACTTGTCCAAGAAAA    200

BSNT_02774___    201 GGTGACTGACCGAATTAAGGACATTGCAGTGAGGGATTTGCTCCCTAAGG    250
                     |||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    201 GGTAACGGACCGAATTAAGGACATTGCAGTGAGGGATTTGCTCCCTAAGG    250

BSNT_02774___    251 AAAAAGTGTTGCAAATTTTGCTTGAAATGGTCCCAACGAATGAAGAAACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    251 AAAAAGTGTTGCAAATTTTGCTTGAAATGGTCCCAACGAATGAAGAAACG    300

BSNT_02774___    301 ATTAGAGAGATGGAGGTTTGGTTTGCTTTTACTGCTTACGCCAGACATAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    301 ATTAGAGAGATGGAGGTTTGGTTTGCTTTTACTGCTTACGCCAGACATAA    350

BSNT_02774___    351 AAAGGATATGTTTGATGCGAATCATGACGGGATTTTCAGCGGCATGCGGA    400
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU17080___pk    351 AAAGGATATGTTTGATGCGAGTCATGACGGGATTTTCAGCGGCATGCGGA    400

BSNT_02774___    401 ATCTGATTGCCTATTTAGATGAATCCGATTTACTGAAGCAGAATGCTGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    401 ATCTGATTGCCTATTTAGATGAATCCGATTTACTGAAGCAGAATGCTGAT    450

BSNT_02774___    451 AAAGACATTGAAGCTGAGAGACTTTACGCGCTTGTTGACGGCTTGGCTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17080___pk    451 AAAGACATTGAAGCTGAGAGACTTTACGCGCTTGTTGACGGCTTGGCTTT    500

BSNT_02774___    501 ACATGCCATGCTTGACCCTGTGCGCGTGAATAAAGACCGAATTAAGCGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17080___pk    501 ACATGCCATGCTTGACCCTGTGCGCGTGAATAAAGACCGAATCAAGCGGG    550

BSNT_02774___    551 TCATTATGCAGCATGTAGAGTCAATTTGCGTGGAAGGTAAACGTGAGACA    600
                     ||||||||||||||||||||||||||||||||||||.||.||||||||||
BSU17080___pk    551 TCATTATGCAGCATGTAGAGTCAATTTGCGTGGAAGATACACGTGAGACA    600

BSNT_02774___    601 GAAGAGAAGGA-----ATAA    615
                     .|  |.||.||     .|||
BSU17080___pk    601 CA--AAAACGACATCCTTAA    618


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