Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02879 and BSU17500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_02879.1.22522.seq
# -bsequence dna-align/BSU17500___ynaB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02879-BSU17500___ynaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02879-BSU17500___ynaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02879
# 2: BSU17500___ynaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 535
# Identity: 407/535 (76.1%)
# Similarity: 407/535 (76.1%)
# Gaps: 101/535 (18.9%)
# Score: 1907.0
#
#
#=======================================
BSNT_02879 1 ATGGAAGAAGGAAAGTTAGTTCACATGACATTAGATGGTATTAAGAAAGC 50
BSU17500___yn 0 -------------------------------------------------- 0
BSNT_02879 51 AGTTACTAAATATGGTACATTTCCTGTGTTCCATCATGGGGGTTATGTCT 100
.
BSU17500___yn 1 -------------------------------------------------A 1
BSNT_02879 101 TGGAAGATGCTACTTTTCATTTCAAAAATCCAGCAACTCCTCAAGAAATT 150
||||||||||||||||||||||||||.||||.||.|.|||||||||||||
BSU17500___yn 2 TGGAAGATGCTACTTTTCATTTCAAAGATCCTGCTAGTCCTCAAGAAATT 51
BSNT_02879 151 AGCTGCT-TAGAAAAGAAATTAGGTGTTACTTTTCCTAATGACTTTAAAG 199
||| |.| |||||.||||..|||||||||||||.||||||||||.|||||
BSU17500___yn 52 AGC-GATATAGAACAGAAGCTAGGTGTTACTTTCCCTAATGACTATAAAG 100
BSNT_02879 200 AGTTTTTGTTACAACACAATGGGATGGAAATGTTTGATGGCATTGAAATA 249
|||||||||||||.||||||||||||||||||||||||||.|||||||||
BSU17500___yn 101 AGTTTTTGTTACAGCACAATGGGATGGAAATGTTTGATGGGATTGAAATA 150
BSNT_02879 250 CTTAGCTTAGAGGGAATCGTTGAATATAATGAGGTTCAAGATTTCCCAGA 299
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU17500___yn 151 CTTAGCTTAGAGGGAATCATTGAATATAATGAGGTTCAAGATTTCCCAGA 200
BSNT_02879 300 GGGATACTTATTAATAGGATATCATTTTGATGGAAGGTATGTCATAGACA 349
|||||||.|.|||||.||||||||||||||||||||.|||||||||||||
BSU17500___yn 201 GGGATACGTTTTAATTGGATATCATTTTGATGGAAGATATGTCATAGACA 250
BSNT_02879 350 CAAACAAATCAAAAAAAGGATTAGGTTATATGTTATATCTAGACTCAATT 399
||||||||||||||||.||||||||.||||||.|||||||||||||||||
BSU17500___yn 251 CAAACAAATCAAAAAATGGATTAGGCTATATGCTATATCTAGACTCAATT 300
BSNT_02879 400 GACGATATTGAAGATGCAATTAACTTAAATTCTAATTTTGAGATATGGTT 449
||.||||||||||||||.|||||||||.||||||||||.|||||||||||
BSU17500___yn 301 GATGATATTGAAGATGCGATTAACTTAGATTCTAATTTCGAGATATGGTT 350
BSNT_02879 450 TGATATGCTAGTGTCTTCTAATGGAACGAAATATTGGGAAGTAAATCCGA 499
|||||||||||||||||..|||||||||||||||||||||||||||||||
BSU17500___yn 351 TGATATGCTAGTGTCTTTAAATGGAACGAAATATTGGGAAGTAAATCCGA 400
BSNT_02879 500 ATCTCCAAGAGTATTATAAACTGGTTTCAGAATAA 534
|||||||||||||||||||||||||||||||||||
BSU17500___yn 401 ATCTCCAAGAGTATTATAAACTGGTTTCAGAATAA 435
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