Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02895 and BSU17540

See Amino acid alignment / Visit BSNT_02895 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence dna-align/BSNT_02895.1.22522.seq
#    -bsequence dna-align/BSU17540___ynaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02895-BSU17540___ynaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02895-BSU17540___ynaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02895
# 2: BSU17540___ynaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity:     154/354 (43.5%)
# Similarity:   154/354 (43.5%)
# Gaps:         195/354 (55.1%)
# Score: 750.0
# 
#
#=======================================

BSNT_02895         0 --------------------------------------------------      0
                                                                       
BSU17540___yn      1 ATGGTATTATGTGATGATGAGAGATCTGCATTTTTATTAGTACTTGATGA     50

BSNT_02895         0 --------------------------------------------------      0
                                                                       
BSU17540___yn     51 AAGATTAGTGGATTTTGATTCTCAAGGTGGAAACCATATTAGTGTTTATT    100

BSNT_02895         0 --------------------------------------------------      0
                                                                       
BSU17540___yn    101 TAGTTACTCACTTTGAGTTATCTGATCAATCGTATAAAGATGTATTAAGC    150

BSNT_02895         1 ---------------------------------------------ATGGA      5
                                                                  |||||
BSU17540___yn    151 TTTAATGATGATCTTTTGGGTATGGAGCATAACTGTTCGTATGCAATGGA    200

BSNT_02895         6 TATTCTAAGCGCTAAAGAGGAATTTGATTTCGATTTCCCATTTAATATGC     55
                     |||||||||||.||||||||||.|||||||||||||||||||||||||||
BSU17540___yn    201 TATTCTAAGCGTTAAAGAGGAACTTGATTTCGATTTCCCATTTAATATGC    250

BSNT_02895        56 TTGCAATAAAAAGCTATGTACAAGAATTAATAAAAATGTTAGGGATTGAT    105
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17540___yn    251 TTGCAATAAAAAGCTATGTACAAGAATTAATAAAAATGTTAGGGATTGAT    300

BSNT_02895       106 ATAACTCTGCCTGAAATGAAAGAAAGAGATTTTGACAAACTTTCTCAAGA    155
                     ||.|||||||||||||||||||||||||||||||||||||||||||||.|
BSU17540___yn    301 ATCACTCTGCCTGAAATGAAAGAAAGAGATTTTGACAAACTTTCTCAAAA    350

BSNT_02895       156 TTAA    159
                     .|||
BSU17540___yn    351 CTAA    354


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