Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02915 and BSU17650

See Amino acid alignment / Visit BSNT_02915 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:14
# Commandline: needle
#    -asequence dna-align/BSNT_02915.1.22522.seq
#    -bsequence dna-align/BSU17650___yncE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02915-BSU17650___yncE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02915-BSU17650___yncE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02915
# 2: BSU17650___yncE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity:     202/462 (43.7%)
# Similarity:   202/462 (43.7%)
# Gaps:         255/462 (55.2%)
# Score: 990.0
# 
#
#=======================================

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BSU17650___yn      1 ATGAATAGGGGAGTTAGTTTTCAAATACCGAATGAATATGGAAATTTTCT     50

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BSU17650___yn     51 ATGGAGAATACTGCAGCCGGTAGAAATAGCTAATTATAGGTGGCAAACGA    100

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BSU17650___yn    101 GTGGGGAATCTTATTTTGTTGTAGAAGGAGAGCTCGATGATGAGGAGCTT    150

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BSU17650___yn    151 TTTCATGACTACGAAATTGTTGAGGGGGCAGTTTTTGAGCAACAATTAAA    200

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BSU17650___yn    201 AACGAATCAGTACTATACCATTTTCGTTGAACTGAAAGCATTTCCATATG    250

BSNT_02915         1 -----ATGGTTAATCAAGTCAATACATATGAAGAGTTTGCTGACAGTGAT     45
                          |||||||||||||||||||||||||||||||||||||||||||||
BSU17650___yn    251 GAAAAATGGTTAATCAAGTCAATACATATGAAGAGTTTGCTGACAGTGAT    300

BSNT_02915        46 TGCGAACTTGTCCTGTTGATAGCAGATAATAGCTACGTTTCGATTTACTG     95
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU17650___yn    301 TGCGAACTTGTCCTTTTGATAGCAGATAATAGCTACGTTTCGATTTACTG    350

BSNT_02915        96 TAAAAACAAAAAATTCATTGAAAAACTTTACTTCAATGCTTTACAGAATG    145
                     ||||||||||||..||||||||||||||||||||||||||||||||.|||
BSU17650___yn    351 TAAAAACAAAAATATCATTGAAAAACTTTACTTCAATGCTTTACAGCATG    400

BSNT_02915       146 ATTTTGAAGACGTTCAATTTATCACTGATGAAAATGACACAAGAACAAGC    195
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU17650___yn    401 ATTTTGAAGACGTTCAATTTATAACTGATGAAAATGACACAAGAACAAGC    450

BSNT_02915       196 CTTACTGTATGA    207
                     ||||||||||||
BSU17650___yn    451 CTTACTGTATGA    462


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.