Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02952 and BSU17820

See Amino acid alignment / Visit BSNT_02952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence dna-align/BSNT_02952___yndL.1.22522.seq
#    -bsequence dna-align/BSU17820___yndL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02952___yndL-BSU17820___yndL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02952___yndL-BSU17820___yndL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02952___yndL
# 2: BSU17820___yndL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity:     743/759 (97.9%)
# Similarity:   743/759 (97.9%)
# Gaps:           0/759 ( 0.0%)
# Score: 3651.0
# 
#
#=======================================

BSNT_02952___      1 ATGAAACCGGCCAAAGTATCCCTGCTCCGCCGTTTGCTCCATTCCTTGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn      1 ATGAAACCGGCCAAAGTATCCCTGCTCCGCCGTTTGCTCCATTCCTTGAA     50

BSNT_02952___     51 GCATGTTGATTGTAACATAGCCAAACGTTTTCCATCAACTATTAAAATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn     51 GCATGTTGATTGTAACATAGCCAAACGTTTTCCATCAACTATTAAAATTG    100

BSNT_02952___    101 TAAAATTATTGTTTATTTTTATGGTATTTACTCCGATTTCTTCAATTTAT    150
                     |||||||||||.|.|||||||||||.||||||||||||||||||||||||
BSU17820___yn    101 TAAAATTATTGATGATTTTTATGGTGTTTACTCCGATTTCTTCAATTTAT    150

BSNT_02952___    151 GCTGAAGATATATATCAGAATTTTGAGGAATTAAAAAACAATGAAGATCC    200
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    151 GCTGAAGATGTATATCAGAATTTTGAGGAATTAAAAAACAATGAAGATCC    200

BSNT_02952___    201 TTCTGATTACGGTGTTGTTACGAAAGAAACCGGAAGCCCTGTTCTTGTTT    250
                     |||||||||.||.|||||||||||||||||||||||||||||||||||||
BSU17820___yn    201 TTCTGATTATGGCGTTGTTACGAAAGAAACCGGAAGCCCTGTTCTTGTTT    250

BSNT_02952___    251 TAGCTATTCACGGAGGAGGTATTGAAGGTGGGACAAGTGAAGTAGCCAGA    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||.|||
BSU17820___yn    251 TAGCTATTCACGGAGGAGGTATTGAAGGCGGGACAAGTGAAGTAGCGAGA    300

BSNT_02952___    301 GAGCTCAGCAAAGAGTACTCGATGTATTTATTTGAAGGCTTAAAATCTGC    350
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU17820___yn    301 GAGCTCAGCAAAGAGTACTCGATGTATTTATTTGAAGGCTTAAAATCGGC    350

BSNT_02952___    351 AGGAAACTCAGTCCTGCACATTACGAGCACGCACTTTGATGAACCTCGGG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU17820___yn    351 AGGAAACTCAGTCCTGCACATTACGAGCACACACTTTGATGAACCTCGGG    400

BSNT_02952___    401 CCCTTAAAATGACGGGAAATCATGAATATGTCATTTCATTACACGGGTAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    401 CCCTTAAAATGACGGGAAATCATGAATATGTCATTTCATTACACGGGTAC    450

BSNT_02952___    451 GCAGAAGAAGATCAGCAGATCGAAGTCGGCGGTACAGATCGCGTAAGAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    451 GCAGAAGAAGATCAGCAGATCGAAGTCGGCGGTACAGATCGCGTAAGAGC    500

BSNT_02952___    501 GGCAGATTTAGTTGAGAAATTGCAGCATGCCGGTTTTCCTGCTGTATTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    501 GGCAGATTTAGTTGAGAAATTGCAGCATGCCGGTTTTCCTGCTGTATTGC    550

BSNT_02952___    551 TCAATACGGACCATCCACATGCGGGCGTTAGTCCGAATAACATTGCAAAT    600
                     ||||||.|||||||||.|||||||||||||||||||||||||||||||||
BSU17820___yn    551 TCAATATGGACCATCCGCATGCGGGCGTTAGTCCGAATAACATTGCAAAT    600

BSNT_02952___    601 AAATCAAAAACAGGTTTAAGTATCCAGATAGAAATGAGCACAGGCTTTCG    650
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
BSU17820___yn    601 AAATCAAAAACAGGTTTAAGTATTCAGATAGAAATGAGCACAGGGTTTCG    650

BSNT_02952___    651 AAAGTCTTTGTTCGGCATCTTTTCTTTAAAAAGCAGAGCTGTTACTCAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    651 AAAGTCTTTGTTCGGCATCTTTTCTTTAAAAAGCAGAGCTGTTACTCAAA    700

BSNT_02952___    701 ATGAGAGGTTTTATAAGTTTACAGAAGTGATGTTCCGTTTTCTCAAATAT    750
                     ||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU17820___yn    701 ATGAGAGGTTTTATGAGTTTACAGAAGTGATGTTCCGTTTTCTCAAAAAT    750

BSNT_02952___    751 AGCTACTGA    759
                     |||||||||
BSU17820___yn    751 AGCTACTGA    759


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