Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02953 and BSU17830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:16
# Commandline: needle
# -asequence dna-align/BSNT_02953.1.22522.seq
# -bsequence dna-align/BSU17830___yndM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02953-BSU17830___yndM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02953-BSU17830___yndM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02953
# 2: BSU17830___yndM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 443/540 (82.0%)
# Similarity: 443/540 (82.0%)
# Gaps: 90/540 (16.7%)
# Score: 2187.0
#
#
#=======================================
BSNT_02953 0 -------------------------------------------------- 0
BSU17830___yn 1 ATGACCATTATGAATGGTTTTGAATTGCATTATTTATCATTTGTTTACGC 50
BSNT_02953 1 ----------------------------------------ATGAAACATA 10
||||||||||
BSU17830___yn 51 CCAAGAATTTTCTTCAAAAAATAACAATTTAGGTGGTCAAATGAAACATA 100
BSNT_02953 11 TCATTGCGCTTGCTTCAAAGATTGCTTTCACTCTCGCCCTTTTATATGTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17830___yn 101 TCATTGCGCTTGCTTCAAAGATTGCTTTCACTCTCGCCCTTTTATATGTG 150
BSNT_02953 61 ATTTTGGACAGAGTCTATCACGCATCCTTCTTAAGTGTGATGTTTATTGC 110
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU17830___yn 151 ATTTTGGACAGAGTCTATCACGCATCCTTTTTAAGTGTGATGTTTATTGC 200
BSNT_02953 111 ACTTTTCTTAGGTTTTGTTTCCTATCTTTCTGGTGACATGCTCGTCTTAC 160
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17830___yn 201 ACTTTTCTTAGGTTTTGTTTCCTATCTTTCTGGTGACATGCTCGTCTTAC 250
BSNT_02953 161 CCAGAACAAACAATATTACAGCTTCATTGGCTGACTTTGGCCTTTCATTC 210
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17830___yn 251 CCAGAACAAACAATATTACAGCTTCATTGGCTGACTTTGGCCTTTCATTC 300
BSNT_02953 211 GTTATTCTTTGGGTATTTGTTTTAACCCAAACAAGAAACGATTTCTCACC 260
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17830___yn 301 GTTATTCTTTGGGTATTTGTTTTAACCCAAACAAGAAACGATTTCTCACC 350
BSNT_02953 261 ATTTGGAGCAGCTCTCCTTTCCGCTGCCTGTCTTACTGTTTTTGAATTCT 310
|||||||||.|||||||||||||||||||||||||||||||||||||.||
BSU17830___yn 351 ATTTGGAGCGGCTCTCCTTTCCGCTGCCTGTCTTACTGTTTTTGAATACT 400
BSNT_02953 311 TTTTTCATCGGTATTTATTGAAAAATGTACTTGATGAAAATTTCCGAAAT 360
|||||||||||||||||.||||||||||.|||||||||||||||||||||
BSU17830___yn 401 TTTTTCATCGGTATTTACTGAAAAATGTGCTTGATGAAAATTTCCGAAAT 450
BSNT_02953 361 GAACTGTCAGCGAGAGATAACACGTTGCAGTATCAAACGGAAGCCGCGGA 410
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17830___yn 451 GAACTGTCAGCGAGAGATAACACGTTGCAGTATCAAACGGAAGCCGCGGA 500
BSNT_02953 411 CGAGCTGTTTCCCGAAACGAATGAGAAGCATAAAGAATAG 450
|||||||||||||||||||||.|||||||||||.||||||
BSU17830___yn 501 CGAGCTGTTTCCCGAAACGAAAGAGAAGCATAAGGAATAG 540
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