Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02957 and BSU17860

See Amino acid alignment / Visit BSNT_02957 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence dna-align/BSNT_02957___yneA.1.22522.seq
#    -bsequence dna-align/BSU17860___yneA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02957___yneA-BSU17860___yneA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02957___yneA-BSU17860___yneA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02957___yneA
# 2: BSU17860___yneA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     308/318 (96.9%)
# Similarity:   308/318 (96.9%)
# Gaps:           6/318 ( 1.9%)
# Score: 1524.0
# 
#
#=======================================

BSNT_02957___      1 ------ATGAGTAAAGAATCTATTATTTTTGTCGGTCTGTTCACAGTGAT     44
                           |||||||||||||||||||||||||||||||||||.||||||||
BSU17860___yn      1 ATGATCATGAGTAAAGAATCTATTATTTTTGTCGGTCTGTTTACAGTGAT     50

BSNT_02957___     45 TTTGAGCGCGGTTATCCTTATGCTGTCATATACAAGCAGCGGCCAAGAGC     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17860___yn     51 TTTGAGCGCGGTTATCCTTATGCTGTCATATACAAGCAGCGGCCAAGAGC    100

BSNT_02957___     95 TTAATCAGTATGTTAAAATAGAAGTCCAGCAAGGCGACACACTTTGGTCA    144
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU17860___yn    101 TTAATCAGTATGTTAAAATAGAAGTCCAGCAAGGCGACACACTCTGGTCA    150

BSNT_02957___    145 ATTGCTGATCAGGTAGCAGATACAAAAAAGATAAACAAAAATGATTTTAT    194
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU17860___yn    151 ATTGCTGATCAGGTAGCCGATACAAAAAAGATAAACAAAAATGATTTTAT    200

BSNT_02957___    195 TGAATGGGTAGCTGATAAAAATCAACTTCAAACCTCTGATATCCAGCCGG    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17860___yn    201 TGAATGGGTAGCTGATAAAAATCAACTTCAAACCTCTGATATCCAGCCGG    250

BSNT_02957___    245 GTGATGAGTTAGTGATCCCATTGAAAAAGAAGCATCAGGATGCATATGAA    294
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17860___yn    251 GTGATGAGTTAGTGATCCCATTGAAAAAGAAGCATCAGGATGCATATGAA    300

BSNT_02957___    295 TTGGCAACTGTAAGATAG    312
                     ||.|||||||||||||||
BSU17860___yn    301 TTAGCAACTGTAAGATAG    318


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