Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02986 and BSU18050

See Amino acid alignment / Visit BSNT_02986 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence dna-align/BSNT_02986___yneQ.1.22522.seq
#    -bsequence dna-align/BSU18050___yneQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02986___yneQ-BSU18050___yneQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02986___yneQ-BSU18050___yneQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02986___yneQ
# 2: BSU18050___yneQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     295/300 (98.3%)
# Similarity:   295/300 (98.3%)
# Gaps:           0/300 ( 0.0%)
# Score: 1455.0
# 
#
#=======================================

BSNT_02986___      1 ATGGCGTTTGGTGTGAAACGGGAGGAACTTAACCGGTGGAAACAAGCAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18050___yn      1 ATGGCGTTTGGTGTGAAACGGGAGGAACTTAACCGGTGGAAACAAGCAGT     50

BSNT_02986___     51 GAAAAGAGGAGAAATCGCATTTTTAACACATTACTGGCTGGATGACCGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18050___yn     51 GAAAAGAGGAGAAATCGCATTTTTAACACATTACTGGCTGGATGACCGAT    100

BSNT_02986___    101 TTCCAGAAGCAAAGACTGTGACAAAAGCCGGATGTGCAGACATTGATAAG    150
                     ||||||||||||||||.||||||||||||||.||||||||||||||||||
BSU18050___yn    101 TTCCAGAAGCAAAGACCGTGACAAAAGCCGGCTGTGCAGACATTGATAAG    150

BSNT_02986___    151 CTGGTTCAGTGGGGAGCGGCGTACGGGTTAAAAAAAGAATGGATCCATAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18050___yn    151 CTGGTTCAGTGGGGAGCGGCGTACGGGTTAAAAAAAGAATGGATCCATAA    200

BSNT_02986___    201 GAAAAGTGAATTTCCTCACTTTGATCTGCTGGGTGAAACACAAAAATATG    250
                     |||||||||||||||.|||||||||||||||||.|||||||||||||||.
BSU18050___yn    201 GAAAAGTGAATTTCCCCACTTTGATCTGCTGGGGGAAACACAAAAATATA    250

BSNT_02986___    251 TTTTGGAACAAGAAAACCTAACCGATCATCTTATACGATTTCATTTGTAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18050___yn    251 TTTTGGAACAAGAAAACCTAACCGATCATCTTATACGATTTCATTTGTAA    300


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