Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02996 and BSU18110
See
Amino acid alignment /
Visit
BSNT_02996 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence dna-align/BSNT_02996.1.22522.seq
# -bsequence dna-align/BSU18110___ynfC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02996-BSU18110___ynfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02996-BSU18110___ynfC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02996
# 2: BSU18110___ynfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 350/411 (85.2%)
# Similarity: 350/411 (85.2%)
# Gaps: 57/411 (13.9%)
# Score: 1734.0
#
#
#=======================================
BSNT_02996 0 -------------------------------------------------- 0
BSU18110___yn 1 ATGGATTGGGGTATTATTATAAAAATATTCAGTAATATTAAAGGAGGGGG 50
BSNT_02996 1 -------TTGAAAAAAGTAACGATATTGAAAGCATCCATCTTATTCTTGG 43
|||||||||||||||||||||||||||||||||||||||||||
BSU18110___yn 51 AGATCATTTGAAAAAAGTAACGATATTGAAAGCATCCATCTTATTCTTGG 100
BSNT_02996 44 CGATTGCCAGTTTTCATTTGCTCTCAATTCCCCACGCCTTTGATATCGGT 93
||||||||||||||||||||.||||||||||||||||||||||||||||.
BSU18110___yn 101 CGATTGCCAGTTTTCATTTGTTCTCAATTCCCCACGCCTTTGATATCGGC 150
BSNT_02996 94 CATCATTATAAAGCCGTAGCCGACCAGCAGGAAATGCATGAAATGAAAGC 143
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU18110___yn 151 CATCATTATAAAGCCGTAGCCGACCAGCAGGAAATGCATGAGATGAAAGC 200
BSNT_02996 144 CGGCCAAAATGCTGATGATGAGAAGAAATCCATCACAGGGGCATTTACAC 193
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU18110___yn 201 CGGCCAAAATGCTGATGATGAGAAGAAATCCATCACAGGGGCATTTACGC 250
BSNT_02996 194 TGACCGCTTTATGGGCAATGGCTGTTCTGCTGCTGACCGCTGAAAGCAAA 243
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18110___yn 251 TGACCGCTTTATGGGCAATGGCTGTTCTGCTGCTGACCGCTGAAAGCAAA 300
BSNT_02996 244 AGTACGGGATACTCCCGCAGACGTCAGCGGAAAAAAAGCTTTATACTGGC 293
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18110___yn 301 AGTACGGGATACTCCCGCAGACGTCAGCGGAAAAAAAGCTTTATACTGGC 350
BSNT_02996 294 CAAATTTTATCAATCGTCTTATTTCGGCAAACTTCATGTTCAACATCACC 343
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18110___yn 351 CAAATTTTATCAATCGTCTTATTTCGGCAAACTTCATGTTCAACATCACC 400
BSNT_02996 344 CGATTATGTAA 354
|||||||||||
BSU18110___yn 401 CGATTATGTAA 411
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.