Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03011 and BSU18190

See Amino acid alignment / Visit BSNT_03011 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence dna-align/BSNT_03011___yngC.1.22522.seq
#    -bsequence dna-align/BSU18190___yngC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03011___yngC-BSU18190___yngC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03011___yngC-BSU18190___yngC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03011___yngC
# 2: BSU18190___yngC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     590/597 (98.8%)
# Similarity:   590/597 (98.8%)
# Gaps:           0/597 ( 0.0%)
# Score: 2922.0
# 
#
#=======================================

BSNT_03011___      1 GTGGGCAGTTTGATAAGCGAAATTTTAACATGGCTGACGAACATGGGATA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn      1 GTGGGCAGTTTGATAAGCGAAATTTTAACATGGCTGACGAACATGGGATA     50

BSNT_03011___     51 TGCGGGTATTGCGATTGGGTTAATGATTGAAATTATTCCGAGTGAGATTG    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU18190___yn     51 TGCGGGTATTGCGATTGGGTTAATGATTGAAATCATTCCGAGTGAGATTG    100

BSNT_03011___    101 TATTAGCTTATGGAGGCTATATGGTATCGGAAGGCACGATTGGTTTTATT    150
                     |||||||||||||.|||||||||||||||||.|||||||||||.||||||
BSU18190___yn    101 TATTAGCTTATGGCGGCTATATGGTATCGGAGGGCACGATTGGATTTATT    150

BSNT_03011___    151 GGCGCAATTATTGCGGGTGTTATCGGGGGCACCATTGCCCAGATCTTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    151 GGCGCAATTATTGCGGGTGTTATCGGGGGCACCATTGCCCAGATCTTTAT    200

BSNT_03011___    201 TTACTGGATCGGCCGCTATGGCGGCAGGCCATTTCTGGACAAATACGGGA    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU18190___yn    201 TTACTGGATCGGTCGCTATGGCGGCAGGCCATTTCTGGACAAATACGGGA    250

BSNT_03011___    251 AGTATTTATTGATTAAAAAGCATCATATCGACATGTCGGAAAACTGGTTT    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU18190___yn    251 AGTATTTATTGATTAAAAAGCATCATATCGATATGTCGGAAAACTGGTTT    300

BSNT_03011___    301 CAGAAATACGGCGCCGGAGTTGTCTTCTCGGCTCGTTTTATACCGGTTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    301 CAGAAATACGGCGCCGGAGTTGTCTTCTCGGCTCGTTTTATACCGGTTGT    350

BSNT_03011___    351 CAGACATGCCATATCCATTCCGGCAGGTATTGCCAGAATGCCTTTTCTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    351 CAGACATGCCATATCCATTCCGGCAGGTATTGCCAGAATGCCTTTTCTCA    400

BSNT_03011___    401 AATTTGTGGTACTGACTGTGCTTGCTATCATTCCATGGTCTATTCTGTTT    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU18190___yn    401 AATTTGTGGTACTGACTGTGCTTGCTATCATTCCATGGTCTATCCTGTTT    450

BSNT_03011___    451 GTTTATTTAGGCATACAGCTAGGAAGCCAGTGGGATGATGTTGAGAATAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    451 GTTTATTTAGGCATACAGCTAGGAAGCCAGTGGGATGATGTTGAGAATAT    500

BSNT_03011___    501 AGCAGGCACTTATACAACACCGATTATGATATTGGCTGTTGTCGTGATAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    501 AGCAGGCACTTATACAACACCGATTATGATATTGGCTGTTGTCGTGATAG    550

BSNT_03011___    551 CCCTTTATTTTGTGATTAAGAAACGTACAGCCATATTTAAACGATAG    597
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU18190___yn    551 CCCTTTATTTTGTGATTAAGAAACGTACAGCCATATTTAAACGATAG    597


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