Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03022 and BSU18270

See Amino acid alignment / Visit BSNT_03022 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:25
# Commandline: needle
#    -asequence dna-align/BSNT_03022___ynzE.1.22522.seq
#    -bsequence dna-align/BSU18270___ynzE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03022___ynzE-BSU18270___ynzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03022___ynzE-BSU18270___ynzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03022___ynzE
# 2: BSU18270___ynzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     296/306 (96.7%)
# Similarity:   296/306 (96.7%)
# Gaps:           0/306 ( 0.0%)
# Score: 1440.0
# 
#
#=======================================

BSNT_03022___      1 TTGTTGACTGATCCGGCTGAAGAAGCCTTTTTGCCGAACTTTCTTCTCTT     50
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU18270___yn      1 GTGTTGACTGATCCGGCTGAAGAAGCCTTTTTGCCGAACTTTCTTCTCTT     50

BSNT_03022___     51 GGGAGCGGACACCGCTCTTGTTTTATGCCTTGTGTTCTTTCTCTATCAAA    100
                     ||||||||.|||.|||||||||||||||||||||||||||||||||||||
BSU18270___yn     51 GGGAGCGGGCACTGCTCTTGTTTTATGCCTTGTGTTCTTTCTCTATCAAA    100

BSNT_03022___    101 AACTCGATCAATCACAGTTCGCGGTGATAAAGCTAGGTATATGGGGATCA    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU18270___yn    101 AACTCGATCAATCACAGTTCGCGGTGATCAAGCTAGGTATATGGGGATCA    150

BSNT_03022___    151 GCGGTCGGTTTATTGATTGATACGATTTCCCTTTGGAATCATCCCCTCAT    200
                     |||||||||||||||||.||||||||||||||||||||||.|||||||||
BSU18270___yn    151 GCGGTCGGTTTATTGATGGATACGATTTCCCTTTGGAATCTTCCCCTCAT    200

BSNT_03022___    201 CCTCCCGGCTTTATCAAAGGGCCAAGTTATTGCGTTTGCGATATGGATGG    250
                     |.|||||||||||||||||||||||||||||||||||.||||||||||||
BSU18270___yn    201 CTTCCCGGCTTTATCAAAGGGCCAAGTTATTGCGTTTACGATATGGATGG    250

BSNT_03022___    251 TATGCGCCTACTGCATGTATTTGCTCATTCCGCTGAAATTATCACATAAA    300
                     ||||||||||||||||||||||||||||.|||||||.|||||||||||||
BSU18270___yn    251 TATGCGCCTACTGCATGTATTTGCTCATCCCGCTGATATTATCACATAAA    300

BSNT_03022___    301 AAATGA    306
                     ||||||
BSU18270___yn    301 AAATGA    306


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