Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03103 and BSU19050

See Amino acid alignment / Visit BSNT_03103 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:33
# Commandline: needle
#    -asequence dna-align/BSNT_03103___yobQ.1.22522.seq
#    -bsequence dna-align/BSU19050___yobQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03103___yobQ-BSU19050___yobQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03103___yobQ-BSU19050___yobQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03103___yobQ
# 2: BSU19050___yobQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity:     705/726 (97.1%)
# Similarity:   705/726 (97.1%)
# Gaps:           6/726 ( 0.8%)
# Score: 3465.0
# 
#
#=======================================

BSNT_03103___      1 ------ATGGATTCGCTTCAAGAGATGATTTGCGAAAAACGGACATACAC     44
                           |||||.||||||||||||||.|||||||||||||||||||||||
BSU19050___yo      1 TTGCTAATGGACTCGCTTCAAGAGATAATTTGCGAAAAACGGACATACAC     50

BSNT_03103___     45 ACGCCTTTATCATTCACATAAGCACGCATACAGCCAATTTCTTTTTCCGC     94
                     |||.||.||||||||||||||||||||.||||||||||||||||||||||
BSU19050___yo     51 ACGGCTATATCATTCACATAAGCACGCGTACAGCCAATTTCTTTTTCCGC    100

BSNT_03103___     95 TTGAAGGGAGTATTGATCTTGAGACTGAAGAGCGCCAGGTGAAATTAAAG    144
                     ||||||||||||||||||||||||||||.|.||||||||||||||||||.
BSU19050___yo    101 TTGAAGGGAGTATTGATCTTGAGACTGAGGGGCGCCAGGTGAAATTAAAT    150

BSNT_03103___    145 CCAGATCATTTTTTATATATTCCGCCGGAGTGCGAGCATCGTTTCCGTTC    194
                     ||.||||||||||||||||||||||||.|||||||||||||.||||||||
BSU19050___yo    151 CCGGATCATTTTTTATATATTCCGCCGCAGTGCGAGCATCGCTTCCGTTC    200

BSNT_03103___    195 TATCGGAAGAAATGAATGTCTTGTACTGGATGTTCCGCTTCATGCAATGA    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    201 TATCGGAAGAAATGAATGTCTTGTACTGGATGTTCCGCTTCATGCAATGA    250

BSNT_03103___    245 AAATTGATGAGTATCGTGCAGGATCGGGAATTGAAGCTGCACTCGATCCT    294
                     |||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU19050___yo    251 AAATTGATGAGTATCGTGCAGGATCAGGAATTGAAGCTGCCCTCGATCCT    300

BSNT_03103___    295 TTCTGGTCTTCGATCAGGTACTTGCTGACAGAGGAAGCAAAGGCCGGAAC    344
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    301 TTCTGGTCTTCGATCAGGTACTTGCTGACAGAGGAAGCAAAGGCCGGAAC    350

BSNT_03103___    345 AGCCAACTCGCTTCATATGCTAGTACAATACATAAAAGAAAAGCTTCAAT    394
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    351 AGCCAACTCGCTTCATATGCTAGTACAATACATAAAAGAAAAGCTTCAAT    400

BSNT_03103___    395 CCCATAGCTATGCCTCAATTGCATACATTCACAGCCATTTATTTGAGCGG    444
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    401 CCCATAGCTATGCCTCAATTGCATACATTCACAGCCATTTATTTGAGCGG    450

BSNT_03103___    445 CTGACGATTAAGAAGCTGGCAGAAATCGAGCATTATCACCCAGCTTACTA    494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    451 CTGACGATTAAGAAGCTGGCAGAAATCGAGCATTATCACCCAGCTTACTA    500

BSNT_03103___    495 TTCAAGCTGGTTCAAAAAACAGACAGGGAAGTCCCCGCAGAACTATATTG    544
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    501 TTCAAGCTGGTTCAAAAAACAGACAGGGAAGTCCCCGCAGAACTATATTG    550

BSNT_03103___    545 CCGACCTTCGCCTTGAGGAAGCAAAACGAATGCTGATGGAGAGAAATGAA    594
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19050___yo    551 CCGACCTTCGCCTTGAGGAAGCAAAAAGAATGCTGATGGAGAGAAATGAA    600

BSNT_03103___    595 ACCCTTACCGTCGTGAGCGAGGCGCTGGGCTTTCAAAACCTTTCTTCTTT    644
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    601 ACTCTTACCGTCGTGAGCGAGGCGCTGGGCTTTCAAAACCTTTCTTCTTT    650

BSNT_03103___    645 TACAAGATGGTTCACGAAAAGCACAGGAATGCCGCCCCGCCTGTATCGAA    694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19050___yo    651 TACAAGATGGTTCACGAAAAGCACAGGAATGCCGCCCCGCCTGTATCGAA    700

BSNT_03103___    695 ACACCTTATATTCGGATAAAAAATGA    720
                     ||||||||||||||||||||||||||
BSU19050___yo    701 ACACCTTATATTCGGATAAAAAATGA    726


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.