Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03123 and BSU19170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:35
# Commandline: needle
# -asequence dna-align/BSNT_03123___yocD.1.22522.seq
# -bsequence dna-align/BSU19170___yocD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03123___yocD-BSU19170___yocD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03123___yocD-BSU19170___yocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03123___yocD
# 2: BSU19170___yocD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity: 955/978 (97.6%)
# Similarity: 955/978 (97.6%)
# Gaps: 0/978 ( 0.0%)
# Score: 4683.0
#
#
#=======================================
BSNT_03123___ 1 ATGTACGCCTCAAAACTGAAAAAGGGAGACGAAATCCGGATCGTGTCTCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 1 ATGTACGCCTCAAAACTGAAAAAGGGAGACGAAATCCGGATCGTGTCTCC 50
BSNT_03123___ 51 CGCGACCAGCATGTCTATATTATCAAATGAAGCAAAAATTCAAGCAAAAA 100
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU19170___yo 51 CGCGACCAGCATGTCTATATTATCAAATGAAGCAAAAATCCAAGCAAAAA 100
BSNT_03123___ 101 CGGCGTTAGAACGCTTAGGTTATCGGGTAACCATCGCTGAACACGCAAAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 101 CGGCGTTAGAACGCTTAGGTTATCGGGTAACCATCGCTGAACACGCAAAT 150
BSNT_03123___ 151 GAATGTAACGAATTTGATTCATCCTCTATCGAGTCAAGAGTCCAAGATCT 200
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU19170___yo 151 GAATGTAACGAATTTGATTCATCCTCTATCGAGTCAAGAGTCCATGATCT 200
BSNT_03123___ 201 GCACGCTGCCTTTTTTGATCCAGGCGTCAAAGCGATTTTAACGACACTCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 201 GCACGCTGCCTTTTTTGATCCAGGCGTCAAAGCGATTTTAACGACACTCG 250
BSNT_03123___ 251 GAGGGTTTAATTCAAATCAGCTGCTGCGTTATCTTGATTACGAGAAAATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 251 GAGGGTTTAATTCAAATCAGCTGCTGCGTTATCTTGATTACGAGAAAATC 300
BSNT_03123___ 301 AAACGACATCCAAAAATTCTGTGCGGCTATTCCGATATAACCGCTCTTTG 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU19170___yo 301 AAACGACATCCAAAAATTCTGTGCGGTTATTCCGATATAACCGCTCTTTG 350
BSNT_03123___ 351 CAACGCTATTTATCAAAAAACGGGTCTTGTTACGTATTCAGGCCCCTTCT 400
||||||||||||||||||||||||||||||||||||||||||.|||..||
BSU19170___yo 351 CAACGCTATTTATCAAAAAACGGGTCTTGTTACGTATTCAGGTCCCCACT 400
BSNT_03123___ 401 TTTCAACATTTGCAATGAAAAAAGGGCTTGATTATACACAAGAGTATTTT 450
|.|||||||||||||||||||||||.||.|||||||||.|.|||||||||
BSU19170___yo 401 TCTCAACATTTGCAATGAAAAAAGGACTCGATTATACAGAGGAGTATTTT 450
BSNT_03123___ 451 CTTTCTTGCTGCGCTTCGGACGACCCGTTTGAAATTCTTCCTTCAAGTGA 500
|||||||||||||||||.|||||.|||||||||||||..||.||||||||
BSU19170___yo 451 CTTTCTTGCTGCGCTTCAGACGATCCGTTTGAAATTCACCCCTCAAGTGA 500
BSNT_03123___ 501 GTGGAGCGATGACCGCTGGTTTTTGGATCAAGAAAACAGGCGTTTTTATC 550
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU19170___yo 501 GTGGAGCGATGATCGCTGGTTTTTGGATCAAGAAAACAGGCGTTTTTATC 550
BSNT_03123___ 551 CTAATAACGGCCCTGTTGTAATCCAAGAAGGTTATGCGGAAGGTACTTTA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 551 CTAATAACGGCCCTGTTGTAATCCAAGAAGGTTATGCGGAAGGTACTTTA 600
BSNT_03123___ 601 ATTGGCGGAAACTTATGCACGCTTAATTTGCTGCAGGGAACGGAGTATTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 601 ATTGGCGGAAACTTATGCACGCTTAATTTGCTGCAGGGAACGGAGTATTT 650
BSNT_03123___ 651 TCCTGAAACAGAACATACTATTTTATTGATTGAAGATGATTATATGTCAG 700
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 651 TCCCGAAACAGAACATACTATTTTATTGATTGAAGATGATTATATGTCAG 700
BSNT_03123___ 701 ACATCCACATGTTTGACCGCGATCTGCAATCACTCATCCACCTCCCAGCT 750
|||||||.||||||||||||||||||||||||||||||||||||||.|||
BSU19170___yo 701 ACATCCATATGTTTGACCGCGATCTGCAATCACTCATCCACCTCCCCGCT 750
BSNT_03123___ 751 TTTTCACATGTAAAGGCGATTTTGATCGGCAGATTTCAGAAGGCATCAAA 800
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU19170___yo 751 TTTTCACATGTAAAGGCGATTTTGATCGGCAGATTTCAGAAAGCATCAAA 800
BSNT_03123___ 801 CGTATCAATGGATCTTGTAAAAGCCATGATCGAAACAAAAAAAGAATTAT 850
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 801 CGTATCAATAGATCTTGTAAAAGCCATGATCGAAACAAAAAAAGAATTAT 850
BSNT_03123___ 851 CCGGCATCCCGGTCATCGCAAATATAAATGCCGGACATACCTCGCCAATT 900
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU19170___yo 851 CCGGCATCCCGATCATCGCAAATATAAATGCCGGACATACCTCGCCAATT 900
BSNT_03123___ 901 GCCACGTTCCCTATAGGAGGAACATGCAGGATTGAAGCTATTTCGGGTAC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 901 GCCACGTTCCCTATAGGAGGAACATGCAGGATTGAAGCTATTTCGGGTAC 950
BSNT_03123___ 951 ATCACGAATATGGATTGATAAACATTAA 978
||||||||||||||||||||||||||||
BSU19170___yo 951 ATCACGAATATGGATTGATAAACATTAA 978
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