Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03137 and BSU19259

See Amino acid alignment / Visit BSNT_03137 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:36
# Commandline: needle
#    -asequence dna-align/BSNT_03137.1.22522.seq
#    -bsequence dna-align/BSU19259___yoyB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03137-BSU19259___yoyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03137-BSU19259___yoyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03137
# 2: BSU19259___yoyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity:     223/228 (97.8%)
# Similarity:   223/228 (97.8%)
# Gaps:           0/228 ( 0.0%)
# Score: 1095.0
# 
#
#=======================================

BSNT_03137         1 ATGCTTCCGACTAACATCAATATTTCTCATCTCAAGACTAACTCGATAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19259___yo      1 ATGCTTCCGACTAACATCAATATTTCTCATCTCAAGACTAACTCGATAGG     50

BSNT_03137        51 CACCGGCTCATCCCTTACCTTTGGTTCTGCGGAGTTAAGGAACAGGCGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU19259___yo     51 CACCGGCTCATCCCTTACCTTTGGTTCTGCGGAGTTAAGGAACAGGTGCT    100

BSNT_03137       101 CTGCTATCAAAAGAAATAACGGTTTTGGGGAACAAAATGCAGATGTTATT    150
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU19259___yo    101 CTGCTATCAAAAGAAATAACGGTTTTGGGGAACAAAATGCAGATGGTATT    150

BSNT_03137       151 GTCATGGTCATTCCGATTGAATCAATTGATGACCGTGATGGGGCAGATGC    200
                     ||.|||||||||||||||||||||||||||||||||||||.|.|||||||
BSU19259___yo    151 GTTATGGTCATTCCGATTGAATCAATTGATGACCGTGATGTGTCAGATGC    200

BSNT_03137       201 ACTCAGTATGAAAATCAATCATCAATAA    228
                     ||||||||||||||||||||||||||||
BSU19259___yo    201 ACTCAGTATGAAAATCAATCATCAATAA    228


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