Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03161 and BSU19420

See Amino acid alignment / Visit BSNT_03161 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence dna-align/BSNT_03161___yojK.1.22522.seq
#    -bsequence dna-align/BSU19420___yojK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03161___yojK-BSU19420___yojK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03161___yojK-BSU19420___yojK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03161___yojK
# 2: BSU19420___yojK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1218
# Identity:    1190/1218 (97.7%)
# Similarity:  1190/1218 (97.7%)
# Gaps:           0/1218 ( 0.0%)
# Score: 5838.0
# 
#
#=======================================

BSNT_03161___      1 ATGGCAAATGTATTAATGATCGGTTTCCCCGGTGAAGGGCATATTAATCC     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo      1 ATGGCTAATGTATTAATGATCGGTTTCCCCGGTGAAGGGCATATTAATCC     50

BSNT_03161___     51 CTCTATCGGTGTGATGAAGGAGCTGAAATCTCGGGGAGAAAACATTACGT    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU19420___yo     51 CTCTATCGGTGTGATGAAGGAGCTGAAATCCCGGGGAGAAAACATTACGT    100

BSNT_03161___    101 ACTACGCAGTGAAGGAATATAAAGAAAAAATCACAGCTCTTGATATAGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    101 ACTACGCAGTGAAGGAATATAAAGAAAAAATCACAGCTCTTGATATAGAG    150

BSNT_03161___    151 TTTCGTGAGTATCATGATTTCAGGGGAGATTACTTCGGGAAAAACGCAAC    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU19420___yo    151 TTTCGTGAGTATCATGATTTCAGAGGAGATTACTTCGGGAAAAACGCAAC    200

BSNT_03161___    201 CGGTGATGAAGAAAGAGACTTTACTGAAATGATCTGCGCTTTTTTGAAAA    250
                     |||.||||||||||||||.||.||.||||||.|||||||||||||||||.
BSU19420___yo    201 CGGCGATGAAGAAAGAGATTTCACAGAAATGCTCTGCGCTTTTTTGAAAG    250

BSNT_03161___    251 GCTGTAAAGATATTGCGACTCATATTTATGAGGAAGTCAAACATGAATCG    300
                     .||||||.|||||.||||||||||||||||||||||||||||||||||||
BSU19420___yo    251 CCTGTAAGGATATCGCGACTCATATTTATGAGGAAGTCAAACATGAATCG    300

BSNT_03161___    301 TATGATTATGTCATATATGATCACCATCTTCTCGCGGGTAAAGTCATCGC    350
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU19420___yo    301 TATGATTATGTCATATATGATCACCATCTTCTCGCGGGTAAAGTCATTGC    350

BSNT_03161___    351 CAACCTGCTGAAGCTGCCAAGATTTTCATTGTGTACAACCTTTGCGATGA    400
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    351 CAACATGCTGAAGCTGCCAAGATTTTCATTGTGTACAACCTTTGCGATGA    400

BSNT_03161___    401 ATGAGGAATTTGCGAAGGAAATGATGGGAGCGTACATGAAAGGATCACTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    401 ATGAGGAATTTGCGAAGGAAATGATGGGAGCGTACATGAAAGGATCACTT    450

BSNT_03161___    451 GAAGATTCGCCTCATTATGAATCATACCAGCAGCTTGCAGAAACTTTAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU19420___yo    451 GAAGATTCGCCTCATTATGAATCATACCAGCAGCTTGCAGAAACGTTAAA    500

BSNT_03161___    501 TGCTGATTTTCAAGCAGAGATCAAGAAGCCATTTGATGTTTTTTTAGCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    501 TGCTGATTTTCAAGCAGAGATCAAGAAGCCATTTGATGTTTTTTTAGCTG    550

BSNT_03161___    551 ATGGTGACTTGACAATTGTCTTTACATCAAGGGGATTTCAGCCACTGGCT    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU19420___yo    551 ATGGTGACTTGACAATCGTCTTTACATCAAGGGGATTTCAGCCACTGGCT    600

BSNT_03161___    601 GAGCAATTTGGCGAGCGATATGTATTTGTCGGTCCTTCCATTACAGAAAG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    601 GAGCAATTTGGCGAGCGATATGTATTTGTCGGTCCTTCCATTACAGAAAG    650

BSNT_03161___    651 AGCCGGAAACAATGATTTCCCATTTGATCAGATTGACAATGAAAACGTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    651 AGCCGGAAACAATGATTTCCCATTTGATCAGATTGACAATGAAAACGTGC    700

BSNT_03161___    701 TGTTTATTTCAATGGGAACCATTTTTAATAATCAAAAGCAGTTTTTTAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    701 TGTTTATTTCAATGGGAACCATTTTTAATAATCAAAAGCAGTTTTTTAAT    750

BSNT_03161___    751 CAATGCCTTGAAGTGTGTAAGGATTTTGACGGTAAAGTTGTGCTTTCCAT    800
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU19420___yo    751 CAATGCCTTGAAGTGTGTAAGGACTTTGACGGTAAAGTTGTGCTTTCCAT    800

BSNT_03161___    801 CGGCAAGCATATTAAAACAAGTGAGTTAAACGACATTCCGGAGAATTTCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    801 CGGCAAGCATATTAAAACAAGTGAGTTAAACGACATTCCGGAGAATTTCA    850

BSNT_03161___    851 TTGTACGCCCGTATGTCCCTCAGCTTGAGATCTTGAAAAGAGCCAGCTTA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    851 TTGTACGCCCGTATGTCCCTCAGCTTGAGATCTTGAAAAGAGCCAGCTTA    900

BSNT_03161___    901 TTTGTGACACACGGCGGAATGAACAGCACAAGTGAAGGTTTGTATTTTGA    950
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    901 TTTGTGACCCACGGCGGAATGAACAGCACAAGTGAAGGTTTGTATTTTGA    950

BSNT_03161___    951 AACCCCGCTCGTTGTCATTCCGATGGGAGGCGACCAATTTGTTGTCGCAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo    951 AACCCCGCTCGTTGTCATTCCGATGGGAGGCGACCAATTTGTTGTCGCAG   1000

BSNT_03161___   1001 ATCAGGTGGAAAAAGTCGGTGCAGGAAAAGTGTTAAAAAAAGAAGAATTA   1050
                     |||||||.|||||||||||.|||||||||||..|.|||||.||||||||.
BSU19420___yo   1001 ATCAGGTAGAAAAAGTCGGCGCAGGAAAAGTAATTAAAAAGGAAGAATTG   1050

BSNT_03161___   1051 TCTGAAAGCCTGCTGAAAGAGACGATACAAGAAGTAATGAATAATCGTTC   1100
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU19420___yo   1051 TCTGAAAGCCTACTGAAAGAGACGATACAAGAAGTAATGAATAATCGTTC   1100

BSNT_03161___   1101 GTATGCTGAAAAGGCAAAAGAAATTGGACAATCACTGAAAGCGGCAGGCG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19420___yo   1101 GTATGCTGAAAAGGCAAAAGAAATTGGACAATCACTGAAAGCGGCAGGCG   1150

BSNT_03161___   1151 GCTCTAAAAAAGCGGCCGATAGCATTCTTGAAGCTGTAAAACAAAAAACT   1200
                     |||||||||||||.|||||.||||||||||||||||||||||||||||||
BSU19420___yo   1151 GCTCTAAAAAAGCAGCCGACAGCATTCTTGAAGCTGTAAAACAAAAAACT   1200

BSNT_03161___   1201 CAATCAGCAAATGCATAG   1218
                     ||||||||||||||||||
BSU19420___yo   1201 CAATCAGCAAATGCATAG   1218


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