Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03220 and BSU19720
See
Amino acid alignment /
Visit
BSNT_03220 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence dna-align/BSNT_03220___yodR.1.22522.seq
# -bsequence dna-align/BSU19720___yodR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03220___yodR-BSU19720___yodR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03220___yodR-BSU19720___yodR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03220___yodR
# 2: BSU19720___yodR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 651/654 (99.5%)
# Similarity: 651/654 (99.5%)
# Gaps: 0/654 ( 0.0%)
# Score: 3243.0
#
#
#=======================================
BSNT_03220___ 1 ATGGGCTTGGGAGTAGCAGAAAGAGAACAGATTGCAAAACGCGCTGCTAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 1 ATGGGCTTGGGAGTAGCAGAAAGAGAACAGATTGCAAAACGCGCTGCTAC 50
BSNT_03220___ 51 TGAAATTAAGCAGGGCATGATTGTGAATCTCGGTATCGGTATCCCATCCT 100
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU19720___yo 51 TGAAATTAAGCAGGGCATGATTGTGAATCTCGGTATCGGTATCCCTTCCT 100
BSNT_03220___ 101 TGGTACCGAACTTTTTGAAGCCTGACATGCAGGTCATGTTTCAAGCGGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 101 TGGTACCGAACTTTTTGAAGCCTGACATGCAGGTCATGTTTCAAGCGGAA 150
BSNT_03220___ 151 AACGGTGTCCTTGGCATTGGAGAAAGTCCCGAAAAGGGAGAAGAGGATGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 151 AACGGTGTCCTTGGCATTGGAGAAAGTCCCGAAAAGGGAGAAGAGGATGC 200
BSNT_03220___ 201 GCATTTATGCAACGCCGCGGGATATCCTGTCCGCGCTGTAAAAGGGGCGT 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU19720___yo 201 GCATTTATGCAACGCCGCGGGATATCCTGTCCGCGCTGTAAAAGGGGCTT 250
BSNT_03220___ 251 CTTATTTTGATACAACCATGTCTTTTGCAATGATCAGAAAAGGCAAAATT 300
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU19720___yo 251 CTTATTTTGATACAACCATGTCTTTTGCGATGATCAGAAAAGGCAAAATT 300
BSNT_03220___ 301 GACATTACGATTTTAGGCGCCCTGCAGGTGAGCCAATCAGGAGATTTGGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 301 GACATTACGATTTTAGGCGCCCTGCAGGTGAGCCAATCAGGAGATTTGGC 350
BSNT_03220___ 351 AAATTGGCTTGTTCCGGGAAAAAAGGTGCCTGGTATGGGCGGGGCGATGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 351 AAATTGGCTTGTTCCGGGAAAAAAGGTGCCTGGTATGGGCGGGGCGATGG 400
BSNT_03220___ 401 AGCTTGCCCAAAAAGCGAAAAAAGTGGTTGTCGTCATGAGTCATACAGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 401 AGCTTGCCCAAAAAGCGAAAAAAGTGGTTGTCGTCATGAGTCATACAGAT 450
BSNT_03220___ 451 CAAAAGGGAAGGCCTAAATTAACAGAAAGATGTACGCTGCCATTAACTGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 451 CAAAAGGGAAGGCCTAAATTAACAGAAAGATGTACGCTGCCATTAACTGC 500
BSNT_03220___ 501 TGCAGGCTGTGTAGATTTGATTATTACCGAAAAAGCGGTTCTTGAGGTCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 501 TGCAGGCTGTGTAGATTTGATTATTACCGAAAAAGCGGTTCTTGAGGTCG 550
BSNT_03220___ 551 ATAGCCATCACTTCATTTTAAAAGAGCTGATGAATGGCTCGACAATCGAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 551 ATAGCCATCACTTCATTTTAAAAGAGCTGATGAATGGCTCGACAATCGAT 600
BSNT_03220___ 601 GAGGTGACGAGGCTGACAGAAGCTGAAATCAAAATAGATATGCCTTTTTC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19720___yo 601 GAGGTGACGAGGCTGACAGAAGCTGAAATCAAAATAGATATGCCTTTTTC 650
BSNT_03220___ 651 TTAA 654
||||
BSU19720___yo 651 TTAA 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.