Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03229 and BSU19780

See Amino acid alignment / Visit BSNT_03229 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_03229___cgeA.1.22522.seq
#    -bsequence dna-align/BSU19780___cgeA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03229___cgeA-BSU19780___cgeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03229___cgeA-BSU19780___cgeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03229___cgeA
# 2: BSU19780___cgeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity:     295/402 (73.4%)
# Similarity:   295/402 (73.4%)
# Gaps:          90/402 (22.4%)
# Score: 1407.0
# 
#
#=======================================

BSNT_03229___      0 --------------------------------------------------      0
                                                                       
BSU19780___cg      1 ATGAGCTCTGAAAATGCACAGTTAAAAAAGGATTTAATTAAAGCCGTTTT     50

BSNT_03229___      1 ----------------------------------------ATGGATAGTA     10
                                                             ||||||||||
BSU19780___cg     51 AAGCCCTTTATTTCCAACTGCAACAGAAGGAGGAGAAAATATGGATAGTA    100

BSNT_03229___     11 ACCTTAAAGACTTGCTTGAAGCTGCCATCGATCAAAGAGTAGATGAAAGT     60
                     |.|||||||.|||||||||.||||||||||||||||.|||||||||||||
BSU19780___cg    101 ATCTTAAAGCCTTGCTTGATGCTGCCATCGATCAAAAAGTAGATGAAAGT    150

BSNT_03229___     61 GAGATGGTTACGGCAGAATCTCTTTTAGACCCTTCCCTTCCGGCAAGATG    110
                     ||.|.||||||||||||||||.|||||||||||||.||||||||||||||
BSU19780___cg    151 GAAACGGTTACGGCAGAATCTATTTTAGACCCTTCTCTTCCGGCAAGATG    200

BSNT_03229___    111 GATTTTTGCCAGAGTTACGCCAGGCACGACAATCAGCATTGTAACCGATT    160
                     |||||||||||||.|||||||||||||.||||||||||||||.||.||||
BSU19780___cg    201 GATTTTTGCCAGAATTACGCCAGGCACTACAATCAGCATTGTGACTGATT    250

BSNT_03229___    161 CGGGAGACATGATCGGGCCGGTTGTCTTCGTTGCTTTCGATCAGGTTCAC    210
                     |.||.|||||||||||.||||||||.||||||||||||||||||||||||
BSU19780___cg    251 CAGGTGACATGATCGGACCGGTTGTTTTCGTTGCTTTCGATCAGGTTCAC    300

BSNT_03229___    211 GGGATCGTATTTGTAACACAGGAAAGCTCCGTCACTCCAGCAGGCCAAGC    260
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU19780___cg    301 GGGATCGTATTTGTAACACAGGAAAGCTCCGTCACTCCGGCAGGCCAAGC    350

BSNT_03229___    261 TACAACATTAATTGATGTAGACAAAGTAGAAAGCGTTACGTTCTTTTCAT    310
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19780___cg    351 TACAACATTAATTGATGTAGACAAAGTAGAAAGCGTTACGTTCTTTTCAT    400

BSNT_03229___    311 AA    312
                     ||
BSU19780___cg    401 AA    402


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