Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03086 and BSU21500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:32
# Commandline: needle
# -asequence dna-align/BSNT_03086.1.22522.seq
# -bsequence dna-align/BSU21500___uvrX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03086-BSU21500___uvrX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03086-BSU21500___uvrX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03086
# 2: BSU21500___uvrX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1256
# Identity: 405/1256 (32.2%)
# Similarity: 405/1256 (32.2%)
# Gaps: 826/1256 (65.8%)
# Score: 1913.0
#
#
#=======================================
BSNT_03086 1 ATGATTAATTACTCACAATTTCCACGAAAGAATATACTTTGTGTCGATAT 50
||||||.|||||||||||||||||||.|||||||||||||||||||||||
BSU21500___uv 1 ATGATTGATTACTCACAATTTCCACGTAAGAATATACTTTGTGTCGATAT 50
BSNT_03086 51 GAAATCCTTTTATGCTTTTGTATCGGCTGTCTCAATGGGGCTCAATCCTT 100
|||||||||||||||||.||||||||||||..||||||||||.||.||||
BSU21500___uv 51 GAAATCCTTTTATGCTTCTGTATCGGCTGTAACAATGGGGCTTAACCCTT 100
BSNT_03086 101 TAACATGTTACCTTGCTGTTGTAGGGAATACGGAGAGACAGGGAAGTGTA 150
|||||||.||.|||||||||||||||||||||||.|||||||||||||||
BSU21500___uv 101 TAACATGCTATCTTGCTGTTGTAGGGAATACGGATAGACAGGGAAGTGTA 150
BSNT_03086 151 GTGTTAGCTGCATCTCCTGCACTTAAAAAAGATTTTGGAATCAAAACAGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21500___uv 151 GTGTTAGCTGCATCTCCTGCACTTAAAAAAGATTTTGGAATCAAAACAGG 200
BSNT_03086 201 ATCGAAACTTTTTGAGAAACCCGAAAATCCAAGAATACACATTGTAAATC 250
|||||.|||.|||||||.|||.|||.||||||||||||||||||||||||
BSU21500___uv 201 ATCGAGACTATTTGAGATACCTGAAGATCCAAGAATACACATTGTAAATC 250
BSNT_03086 251 CGCAAATGAAGCTTTTCATCAGAGTTTCAACTGAAATTACAAAGCTGTTT 300
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU21500___uv 251 CACAAATGAAGCTTTTCATCAGAGTTTCAACTGAAATTACAAAGCTGTTT 300
BSNT_03086 301 TACAGATTTGTTCCCGAGAAATGCGTACATACGTTCTCTATCGATGAATC 350
||||||||||||||.||||||||.||.|||||||..||.||.||||||||
BSU21500___uv 301 TACAGATTTGTTCCTGAGAAATGTGTCCATACGTATTCAATTGATGAATC 350
BSNT_03086 351 TTTTTTAGATGCAGGAAAAGAAGATCCTGAAGAAATGGCCAAAGCAATAC 400
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU21500___uv 351 TTTTTTAGATGCAGGAAAAGAAGATCCTGAAGAAATGGCCAAAGCAATCC 400
BSNT_03086 401 AAAGCAGTACAGTATGTGGAGAGAATTTGGTTTGA--------------- 435
|||| |||.||||||||||||||||||||||
BSU21500___uv 401 AAAG-----CAGCATGTGGAGAGAATTTGGTTTGATGTGCACAGTTGGTA 445
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 446 TTGGAGACAATATGCTACTCAGTAAGCTTGCACTTGACCTGGAGAGTAAG 495
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 496 AAAACAAAGAGTGGCATTGCACGTTGGAGATATGAAGATGTACCAAATAA 545
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 546 ACTCTGGAAGGTTCGCCCTTTGTCTAAAATGTGGGGGATAGGAGGGAGGA 595
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 596 TGGAAAGAAACCTAAATCGGATGGGAATATCGACTATAGGTCAGTTAGCC 645
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 646 AAATTTCCTTTAGAGCTGCTTGAAAAGAAGTTCGGAATAATGGGAAACCA 695
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 696 GTTGTACTACCATGCTCACGGAATTGATTTATCAGAAATAGGTGCTCCGT 745
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 746 TGATGCAAGGTCAGATTAGTTTCGGTAAGAGTCAGATTTTACTGAGGGAT 795
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 796 TACACAAGGAGTGAAGAGATTAAGGCGGTTCTTCTGGAGATTTGTGAAGA 845
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 846 AGTCGCAAGAAGGGCACGTACACATAATAAAGTTGGTCGAACAATCAGTC 895
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 896 TGGGAATTGGGTACAGTAAGGATGAGCTTGGTGGTGGTTTTCATCGTTCC 945
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 946 AAAACAATTGATCTTCCTACAAGTATCACGATGGATATTTATAGATGCTG 995
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 996 CTTGATGCTTTTTAATAAGTTTTACTCGGGTAAGACTGTGAGAAGTGTCT 1045
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 1046 CAGTCACGTTATCGAATATTGAGGATGATGTTAATCAGCAGCTGAGTTTA 1095
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 1096 TTTGAAGTGGATAATGAAAAGAGAAGGAAACTCGGTTTTGTAATGGATGG 1145
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 1146 GATTAGAAGTAAATACGGCTCTAAAGCGATTCTGAGAGCAGTTTCTTATA 1195
BSNT_03086 435 -------------------------------------------------- 435
BSU21500___uv 1196 CACCAGCAGGAACTGCACTTCAACGAGCTGGATTAACAGGTGGGCATAAG 1245
BSNT_03086 435 ------ 435
BSU21500___uv 1246 AGTTAA 1251
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