Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03241 and BSU21730

See Amino acid alignment / Visit BSNT_03241 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence dna-align/BSNT_03241___ypmS.1.22522.seq
#    -bsequence dna-align/BSU21730___ypmS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03241___ypmS-BSU21730___ypmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03241___ypmS-BSU21730___ypmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03241___ypmS
# 2: BSU21730___ypmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     559/564 (99.1%)
# Similarity:   559/564 (99.1%)
# Gaps:           0/564 ( 0.0%)
# Score: 2775.0
# 
#
#=======================================

BSNT_03241___      1 ATGAATAAGTGGAAGCGACTGTTTTTTATATTGCTTGCAATCAATTTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp      1 ATGAATAAGTGGAAGCGACTGTTTTTTATATTGCTTGCAATCAATTTTAT     50

BSNT_03241___     51 CCTCGCCGCCGGGTTTGTGGCACTTGTTTTGCTCCCGGGGGAACAGGCTC    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU21730___yp     51 CCTCGCCGCCGGGTTTGTGGCACTTGTTTTGCTTCCGGGGGAACAGGCTC    100

BSNT_03241___    101 AGGTGAAGGATTCATCTGAGAGCGAGTATGGATTTCAAGTGACAAGCACA    150
                     |||||||.|||.||||||||||||||||||||||||||||||||||||||
BSU21730___yp    101 AGGTGAAAGATGCATCTGAGAGCGAGTATGGATTTCAAGTGACAAGCACA    150

BSNT_03241___    151 AAAGAATCATTAGCTGCGTTTGTTAACTCATATTTAAACGACAAAGCATC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    151 AAAGAATCATTAGCTGCGTTTGTTAACTCATATTTAAACGACAAAGCATC    200

BSNT_03241___    201 AAACAAGCTTGATTATAAAGTAGAGATTGATGATGATGTTCATGTCGCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    201 AAACAAGCTTGATTATAAAGTAGAGATTGATGATGATGTTCATGTCGCAG    250

BSNT_03241___    251 GGAAAATCAAGGCATTTTCCACGTCTATTGATGCGTTTATCGCTTTTGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    251 GGAAAATCAAGGCATTTTCCACGTCTATTGATGCGTTTATCGCTTTTGAG    300

BSNT_03241___    301 CCGACTGTGAAAAAAAACGGTGATGTAGAGCTGAATGTCACGAAATTTTC    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    301 CCGACCGTGAAAAAAAACGGTGATGTAGAGCTGAATGTCACGAAATTTTC    350

BSNT_03241___    351 GTTAGGGAAATTGAGTATACCAATTAGCTTTGTGTTAAATTATATGGACA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    351 GTTAGGGAAATTGAGTATACCAATTAGCTTTGTGTTAAATTATATGGACA    400

BSNT_03241___    401 GCTTTTATGAATTGCCGTCATTTGTCCATGTTCACCCCGGAGAAAAAAGC    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU21730___yp    401 GCTTTTATGAATTGCCGTCATTTGTCCATGTTCACCCCGGAGATAAAAGC    450

BSNT_03241___    451 ATTGAAGTGCGTTTGTCAGAAATGCCTTTAACGAATGGAATGTATGTCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    451 ATTGAAGTGCGTTTGTCAGAAATGCCTTTAACGAATGGAATGTATGTCAA    500

BSNT_03241___    501 AGCGGATAAGATAAATTTAGAAAAAGATGAAATTGAGTTTTCCTATTACC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21730___yp    501 AGCGGATAAGATAAATTTAGAAAAAGATGAAATTGAGTTTTCCTATTACC    550

BSNT_03241___    551 ATCCTAAACAATAG    564
                     ||||||||||||||
BSU21730___yp    551 ATCCTAAACAATAG    564


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