Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03245 and BSU21760

See Amino acid alignment / Visit BSNT_03245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence dna-align/BSNT_03245___ypmP.1.22522.seq
#    -bsequence dna-align/BSU21760___ypmP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03245___ypmP-BSU21760___ypmP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03245___ypmP-BSU21760___ypmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03245___ypmP
# 2: BSU21760___ypmP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     250/252 (99.2%)
# Similarity:   250/252 (99.2%)
# Gaps:           0/252 ( 0.0%)
# Score: 1242.0
# 
#
#=======================================

BSNT_03245___      1 TTGTTACTCAAAAGCCTAGAGTTCAAACGCGATGACGGGATTCAGGTGAA     50
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU21760___yp      1 TTGTTACTCAAAAGCCTAGAGTTCAAACGCGGTGACGGGATTCAGGTGAA     50

BSNT_03245___     51 AGTGACAGAAATACCTGTATTAAAGGAAGATGAGCACTATTTCTTTATGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21760___yp     51 AGTGACAGAAATACCTGTATTAAAGGAAGATGAGCACTATTTCTTTATGT    100

BSNT_03245___    101 TACATCACCATTTGCAATTCTACTTAAAAGAAGTGTTTTCATCAAACAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21760___yp    101 TACATCACCATTTGCAATTCTACTTAAAAGAAGTGTTTTCATCAAACAGC    150

BSNT_03245___    151 AGGGCAAAAGTGTATTCTTTCCGACATTATATGAAGCGCCGGATGAAGTG    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU21760___yp    151 AGGGCAAAAGTGTATTCTTTCCGACATTATATGAAGCGGCGGATGAAGTG    200

BSNT_03245___    201 GGCAGATTATCAGGCTGTATTTCATCAAGAGGTGTTAAAGCACAACGCGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21760___yp    201 GGCAGATTATCAGGCTGTATTTCATCAAGAGGTGTTAAAGCACAACGCGT    250

BSNT_03245___    251 AA    252
                     ||
BSU21760___yp    251 AA    252


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