Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03263 and BSU21880

See Amino acid alignment / Visit BSNT_03263 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence dna-align/BSNT_03263___ypgR.1.22522.seq
#    -bsequence dna-align/BSU21880___ypgR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03263___ypgR-BSU21880___ypgR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03263___ypgR-BSU21880___ypgR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03263___ypgR
# 2: BSU21880___ypgR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity:    1121/1134 (98.9%)
# Similarity:  1121/1134 (98.9%)
# Gaps:           0/1134 ( 0.0%)
# Score: 5553.0
# 
#
#=======================================

BSNT_03263___      1 ATGAAGATAAAATCAATTGAACCTACACCAAGCCCGAATACAATGAAAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp      1 ATGAAGATAAAATCAATTGAACCTACACCAAGCCCGAATACAATGAAAGT     50

BSNT_03263___     51 CATCTTAACGGAAGAGCTTCCGGCGGGCAAAAGCAATAACTATAAACCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp     51 CATCTTAACGGAAGAGCTTCCGGCGGGCAAAAGCAATAACTATAAACCTG    100

BSNT_03263___    101 AGCAAGCAGAAGGCGCACCGCCTGTTATAGAGGAAATTCTTAAAATAGAT    150
                     |||||||||||||||||||||.||||||||.||||||.||||||||||||
BSU21880___yp    101 AGCAAGCAGAAGGCGCACCGCTTGTTATAGCGGAAATCCTTAAAATAGAT    150

BSNT_03263___    151 GGAGTTAAAGGGGTATATCACGTCGCAGATTTTCTTGCTGTTGAACGGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    151 GGAGTTAAAGGGGTATATCACGTCGCAGATTTTCTTGCTGTTGAACGGAA    200

BSNT_03263___    201 TGCAAGATACGACTGGAAAGACATATTACCGCAAGTCCGCACTGCATTTG    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU21880___yp    201 TGCAAGATACGACTGGAAAGACATTTTACCGCAAGTCCGCACTGCATTTG    250

BSNT_03263___    251 GGATGGAAAGTGCTGAAAGCGGAGAAGAAAATCGTTCTGATCAAGAATCT    300
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU21880___yp    251 GGATGGAAAGTGCTGAAAGCGCAGAAGAAAATCGTTCTGATCAAGAATCT    300

BSNT_03263___    301 TTTGGAGAGGTAAAAGTTTTTGTGCAGATGTTCAGCGGCATTCCTATGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    301 TTTGGAGAGGTAAAAGTTTTTGTGCAGATGTTCAGCGGCATTCCTATGCA    350

BSNT_03263___    351 AGTTAAATTAACCGATGGAGAGCGGGAAGAACGCTTCGGCTTACCTGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    351 AGTTAAATTAACCGATGGAGAGCGGGAAGAACGCTTCGGCTTACCTGAAC    400

BSNT_03263___    401 GCTTTCAGCAGGCGATCTTAAAACTTAGATCTGAAGCTTCCAATGTTGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    401 GCTTTCAGCAGGCGATCTTAAAACTTAGATCTGAAGCTTCCAATGTTGTG    450

BSNT_03263___    451 TTTGAGCGGGCTTGGAAAGAACAAGGTGTCAGATTCGGTGACTTTGATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    451 TTTGAGCGGGCTTGGAAAGAACAAGGTGTCAGATTCGGTGACTTTGATGA    500

BSNT_03263___    501 AATCGGCCATGACGTGACAGAAGAGCTTCAGGCGGCATACAGTGATGAAC    550
                     ||||||||||||.|||||||||||||||||.|||||||||||||||||||
BSU21880___yp    501 AATCGGCCATGATGTGACAGAAGAGCTTCAAGCGGCATACAGTGATGAAC    550

BSNT_03263___    551 GGCTGAAACGACTGACTGAAGCAGCCGCTCAAGGAAAGGGCGAAGCAAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    551 GGCTGAAACGACTGACTGAAGCAGCCGCTCAAGGAAAGGGCGAAGCAAAA    600

BSNT_03263___    601 CAAACTGTACAGCGCAAAGCGTATAAAGTAACGCTTGACATGCTGGATGA    650
                     |||.||||||||||||||||||||||||||||||||||.|||||||||||
BSU21880___yp    601 CAAGCTGTACAGCGCAAAGCGTATAAAGTAACGCTTGATATGCTGGATGA    650

BSNT_03263___    651 TGAGGACTGGAAAAAGCGTTATGCACACTTGGAACAGATGGATCCGAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    651 TGAGGACTGGAAAAAGCGTTATGCACACTTGGAACAGATGGATCCGAAAG    700

BSNT_03263___    701 AAGAGGATATCCCGGTTTTACAGAAGGCATTGGATGATCCAAAGGTGTCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    701 AAGAGGATATCCCGGTTTTACAGAAGGCATTGGATGATCCAAAGGTGTCC    750

BSNT_03263___    751 ATCAGAAGACAGGCTGTTGTGTACTTAGGGATGATTGAAACACCTGATGT    800
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU21880___yp    751 ATCAGAAGACAGGCTGTTGTGTACTTAGGAATGATTGAAACACCTGATGT    800

BSNT_03263___    801 TCTTCCTCTATTGTATAAAGCACTTGAGGACAAAGCTGTATCAGTCAGAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    801 TCTTCCTCTATTGTATAAAGCACTTGAGGACAAAGCTGTATCAGTCAGAA    850

BSNT_03263___    851 GAACGGCCGGAGACTGCCTGTCTGATATCGGCGATCCTCAAGCCATTCCC    900
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU21880___yp    851 GAACGGCCGGAGACTGCCTGTCTGATATCGGCGATCCTCAAGCCATTCCT    900

BSNT_03263___    901 GCTATGATCAAGTCGTTAAGCGACTCCAGCAAGCTTGTTCGCTGGCGTGC    950
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU21880___yp    901 GCTATGATCAAGTCATTAAGCGACTCCAGCAAGCTTGTTCGCTGGCGTGC    950

BSNT_03263___    951 GGCCATGTTCCTGTACGAAGTCGGCGATGAAAGTGCAATTGAAGCTTTGC   1000
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp    951 CGCCATGTTCCTGTACGAAGTCGGCGATGAAAGTGCAATTGAAGCTTTGC   1000

BSNT_03263___   1001 GCGCTGCCGAAGATGACCCCGAATTTGAGGTCAGCCTTCAAGTCAAAATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp   1001 GCGCTGCCGAAGATGACCCCGAATTTGAGGTCAGCCTTCAAGTCAAAATG   1050

BSNT_03263___   1051 GCGCTTGAACGTATTGAGCATGGAGAAGAAGCAAAAGGTTCTGTTTGGAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21880___yp   1051 GCGCTTGAACGTATTGAGCATGGAGAAGAAGCAAAAGGTTCTGTTTGGAA   1100

BSNT_03263___   1101 ACAAATGACGGAAAGCAGAAAAAAAGGCGAATAA   1134
                     ||||||||||||||||||||||||||||||||||
BSU21880___yp   1101 ACAAATGACGGAAAGCAGAAAAAAAGGCGAATAA   1134


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