Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03277 and BSU21990

See Amino acid alignment / Visit BSNT_03277 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_03277___ypdQ.1.22522.seq
#    -bsequence dna-align/BSU21990___ypdQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03277___ypdQ-BSU21990___ypdQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03277___ypdQ-BSU21990___ypdQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03277___ypdQ
# 2: BSU21990___ypdQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity:     387/399 (97.0%)
# Similarity:   387/399 (97.0%)
# Gaps:           0/399 ( 0.0%)
# Score: 1887.0
# 
#
#=======================================

BSNT_03277___      1 ATGCCTACAGAAATATACGTAGACGGCGCAAGCGCTGGTAATCCCGGCCC     50
                     |||||||||||||||||.|||||||||||||||||.||||||||.||.||
BSU21990___yp      1 ATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCAGGGCC     50

BSNT_03277___     51 TTCCGGTATCGGCATTTTTATCAAACATGAGGGAATAGCAGAATCCTTCT    100
                     |||||||||||||||||||||||||||||||||||.|||||||||.||||
BSU21990___yp     51 TTCCGGTATCGGCATTTTTATCAAACATGAGGGAAAAGCAGAATCTTTCT    100

BSNT_03277___    101 CTATTCCAATCGGAGTGCATACAAATCAGGAAGCGGAATTTCTTGCATTA    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU21990___yp    101 CTATTCCAATCGGAGTGCATACAAACCAGGAAGCGGAATTTCTTGCATTA    150

BSNT_03277___    151 ATTGAAGGGATGAAGCTATGTGCAACGCGCGGGTATCAATCGGTTTCCTT    200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU21990___yp    151 ATTGAAGGGATGAAGCTATGTGCAACGCGCGGGTATCAATCAGTTTCCTT    200

BSNT_03277___    201 TCGAACCGATTCAGATATTGTGGAACGCGCCACTGAGCTTGAAATGGTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21990___yp    201 TCGAACCGATTCAGATATTGTGGAACGCGCCACTGAGCTTGAAATGGTTA    250

BSNT_03277___    251 AAAATAAAACGTTTCAACCGTTCGTAGAAGAAATCACCCGATTAAAAGCG    300
                     ||||||.|||||||||||||||.||||||||.||||.|||||||||||||
BSU21990___yp    251 AAAATATAACGTTTCAACCGTTTGTAGAAGAGATCATCCGATTAAAAGCG    300

BSNT_03277___    301 GCATTCCCTCTTTTTTTCATCAAATGGATACCGGGCAAGCAAAACCAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21990___yp    301 GCATTCCCTCTTTTTTTCATCAAATGGATACCGGGCAAGCAAAACCAAAA    350

BSNT_03277___    351 AGCCGATCTTCTGGCAAAAGAAGCGATTCGGCTGAATGAAAAGAATTAA    399
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU21990___yp    351 AGCCGATCTTCTGGCAAAAGAAGCGATTCGGCTGAATGAAAAGAATTAA    399


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