Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03311 and BSU22230

See Amino acid alignment / Visit BSNT_03311 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_03311___ypqE.1.22522.seq
#    -bsequence dna-align/BSU22230___ypqE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03311___ypqE-BSU22230___ypqE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03311___ypqE-BSU22230___ypqE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03311___ypqE
# 2: BSU22230___ypqE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     503/558 (90.1%)
# Similarity:   503/558 (90.1%)
# Gaps:          51/558 ( 9.1%)
# Score: 2499.0
# 
#
#=======================================

BSNT_03311___      1 GTGGTGAATGAAGGGATAACGGTTGAAGTGAATGAGAAGGGAGAAAATAC     50
                                                                       
BSU22230___yp      0 --------------------------------------------------      0

BSNT_03311___     51 ATTGCTGAAAAAATTATTCGGAATGGGCAAAACTCAGGAAAAGGTGACAG    100
                      |||||||||||||||||||||||||||||||.|||||||||||||||||
BSU22230___yp      1 -TTGCTGAAAAAATTATTCGGAATGGGCAAAATTCAGGAAAAGGTGACAG     49

BSNT_03311___    101 AAGAGGTTATTTATTCTCCGGCAGACGGTACAGTAATGGACCTGTCAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp     50 AAGAGGTTATTTATTCTCCGGCAGACGGTACAGTAATGGACCTGTCAGAT     99

BSNT_03311___    151 GTGCCGGACCCTGTTTTTTCACAGAAAATGATGGGAGAAGGAATAGCGGT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    100 GTACCGGACCCTGTTTTTTCACAGAAAATGATGGGAGAAGGAATAGCGGT    149

BSNT_03311___    201 GGAACCTTCTAGCGGTGAAATCGTTTCTCCCGCTGAAGGTGAAGTCATTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    150 GGAACCTTCTAGCGGTGAAATCGTTTCTCCCGCTGAAGGTGAAGTCATTC    199

BSNT_03311___    251 AGATTTTCCACACCAAACACGCCGTTGGCATTCGGACTCGCTCGGGAATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    200 AGATTTTCCACACCAAACACGCCGTTGGCATTCGGACTCGCTCGGGAATT    249

BSNT_03311___    301 GAGCTGTTAATTCATGTCGGGCTGGAGACAGTCAATATGAACGGAGAAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    250 GAGCTGTTAATTCATGTCGGGCTGGAGACAGTCAATATGAACGGAGAAGG    299

BSNT_03311___    351 ATTTACTGCCCACATTAAAGAAGGGGATAAAGTGAAGGTCGGTGACCCGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    300 ATTTACTGCCCACATTAAAGAAGGGGATAAAGTGAAGGTCGGTGACCCGC    349

BSNT_03311___    401 TGATTACATGTGATTTGGAATTAATAAAAGAAAAAGCGAGCAGCACAGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp    350 TGATTACATGTGATTTGGAATTAATAAAAGAAAAAGCGAGCAGCACAGTC    399

BSNT_03311___    451 ATCCCAATCGTTATAATGAATGGTGAGGCTGTAGGATCAATGGTACCGGC    500
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU22230___yp    400 ATCCCAATCGTTATAATGAATGGTGAGGCTGTAGGATCAATGGTATCGGC    449

BSNT_03311___    501 AGGCGAAAAGGCTGCTCGTAAAGGCGAATCAAAGCTCCTTACAATAAAAG    550
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU22230___yp    450 AGGCGAAAAGGCTGCTCGTAAAGGCGAATCAAAGCTCTTTACAATAAAAG    499

BSNT_03311___    551 CGAAATAA    558
                     ||||||||
BSU22230___yp    500 CGAAATAA    507


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