Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03319 and BSU22280

See Amino acid alignment / Visit BSNT_03319 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_03319___yppD.1.22522.seq
#    -bsequence dna-align/BSU22280___yppD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03319___yppD-BSU22280___yppD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03319___yppD-BSU22280___yppD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03319___yppD
# 2: BSU22280___yppD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     242/246 (98.4%)
# Similarity:   242/246 (98.4%)
# Gaps:           0/246 ( 0.0%)
# Score: 1194.0
# 
#
#=======================================

BSNT_03319___      1 ATGTCCGGTTATGTATGCAAGACAGATATTCTCCGTATGCTTTCTGATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22280___yp      1 ATGTCCGGTTATGTATGCAAGACAGATATTCTCCGTATGCTTTCTGATAT     50

BSNT_03319___     51 AGAAGATGAATTAACGCGAGCTGAGCAAAGCCTGAATCATTCTGTAAATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22280___yp     51 AGAAGATGAATTAACGCGAGCTGAGCAAAGCCTGAATCATTCTGTAAATG    100

BSNT_03319___    101 CATTAGAGGCTGAGATGCGGGAAACGGAAAACGATCGCCTGAGTGTGCTG    150
                     ||||||||||||||||||||||||||||.|||||||||||.||||||||.
BSU22280___yp    101 CATTAGAGGCTGAGATGCGGGAAACGGAGAACGATCGCCTAAGTGTGCTC    150

BSNT_03319___    151 GAAGAAGAAATTATAGATCTTCATATTTGTATAAATGAGCTGTATCAATC    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU22280___yp    151 GAAGAAGAAATCATAGATCTTCATATTTGTATAAATGAGCTGTATCAATC    200

BSNT_03319___    201 GCCTGAACACAGGTATGCGTTTGAGAAGGTATACCGCATCGGCTGA    246
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU22280___yp    201 GCCTGAACACAGGTATGCGTTTGAGAAGGTATACCGCATCGGCTGA    246


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