Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03321 and BSU22290

See Amino acid alignment / Visit BSNT_03321 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_03321.1.22522.seq
#    -bsequence dna-align/BSU22290___sspM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03321-BSU22290___sspM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03321-BSU22290___sspM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03321
# 2: BSU22290___sspM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:     105/135 (77.8%)
# Similarity:   105/135 (77.8%)
# Gaps:          30/135 (22.2%)
# Score: 525.0
# 
#
#=======================================

BSNT_03321         1 ATGCAAACGATACTTGTGAGGAGGTGCCGTATGAAAACAAGACCGAAAAA     50
                                                   ||||||||||||||||||||
BSU22290___ss      1 ------------------------------ATGAAAACAAGACCGAAAAA     20

BSNT_03321        51 AGCCGGCCAGCAAAAAAAGACTGAATCAAAGGCAATCGATTCTTTAGATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22290___ss     21 AGCCGGCCAGCAAAAAAAGACTGAATCAAAGGCAATCGATTCTTTAGATA     70

BSNT_03321       101 AAAAATTAGGCGGCCCGAACCGCCCTTCTACGTAA    135
                     |||||||||||||||||||||||||||||||||||
BSU22290___ss     71 AAAAATTAGGCGGCCCGAACCGCCCTTCTACGTAA    105


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