Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03332 and BSU22360

See Amino acid alignment / Visit BSNT_03332 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_03332___asnC.1.22522.seq
#    -bsequence dna-align/BSU22360___asnS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03332___asnC-BSU22360___asnS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03332___asnC-BSU22360___asnS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03332___asnC
# 2: BSU22360___asnS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity:    1283/1296 (99.0%)
# Similarity:  1283/1296 (99.0%)
# Gaps:           3/1296 ( 0.2%)
# Score: 6375.0
# 
#
#=======================================

BSNT_03332___      1 ATGTTGAAAACAACAATCAACCAAGTGTACAAGCACGTAGGTGAGGAAGT     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as      1 ---TTGAAAACAACAATCAACCAAGTGTACAAGCACGTAGGTGAGGAAGT     47

BSNT_03332___     51 AACGATCGGAGCTTGGGTCGCTAATAAGCGTTCAAGCGGGAAAATTGCGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as     48 AACGATCGGAGCTTGGGTCGCTAATAAGCGTTCAAGCGGGAAAATTGCGT     97

BSNT_03332___    101 TTTTACAGCTTCGGGACGGTACCGGTTTTATTCAGGGTGTCGTAGTAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as     98 TTTTACAGCTTCGGGACGGTACCGGTTTTATTCAGGGTGTCGTAGTAAAA    147

BSNT_03332___    151 GCGGAAGTGGAAGAAAGCATTTTCCAAACAGCTAAATCAGTGACGCAGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    148 GCGGAAGTGGAAGAAAGCATTTTCCAAACAGCTAAATCAGTGACGCAGGA    197

BSNT_03332___    201 AACGTCGCTCTATATAAAAGGGATTGTCAAAGAGGACGAGCGTTCTCCGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    198 AACGTCGCTCTATATAAAAGGGATTGTCAAAGAGGACGAGCGTTCTCCGC    247

BSNT_03332___    251 TTGGATATGAACTTGCTGTGACAGATATTGAAGTCATTCACGAAGCGACC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    248 TTGGATATGAACTTGCTGTGACAGATATTGAAGTCATTCACGAAGCGACC    297

BSNT_03332___    301 GATTATCCAATTACACCAAAAGAACACGGAACGGAATTTTTGATGGATCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    298 GATTATCCAATTACACCAAAAGAACACGGAACGGAATTTTTGATGGATCA    347

BSNT_03332___    351 CAGACATTTATGGCTGCGTTCAAAGCGCCAGCATGCGATCATGAAAATCC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    348 CAGACATTTATGGCTGCGTTCAAAGCGCCAGCATGCGATCATGAAAATCC    397

BSNT_03332___    401 GTAATGAAATCATTCGCGCGACTTACGAATTCTTTAATAACGAAGGCTTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    398 GTAATGAAATCATTCGCGCGACTTACGAATTCTTTAATAACGAAGGCTTC    447

BSNT_03332___    451 GTAAAAGTGGATCCGCCGATTTTGACTGGAAGCGCACCTGAAGGAACAAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    448 GTAAAAGTGGATCCGCCGATTTTGACTGGAAGCGCACCTGAAGGAACAAC    497

BSNT_03332___    501 AGAACTCTTTGCGACAAAGTACTTTGATGAAGATGCGTATCTGTCTCAAA    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU22360___as    498 AGAACTCTTTGCGACAAAGTACTTTGATGAAGATGCATATCTGTCTCAAA    547

BSNT_03332___    551 GCGGCCAGCTCTACATGGAAGCTGCGGCAATGGCTTTAGGAAAAGTATTC    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    548 GCGGACAGCTCTACATGGAAGCTGCGGCAATGGCTTTAGGAAAAGTATTC    597

BSNT_03332___    601 TCTTTCGGACCGACATTCAGAGCGGAAAAGTCTAAAACAAAGCGTCACTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    598 TCTTTCGGACCGACATTCAGAGCGGAAAAGTCTAAAACAAAGCGTCACTT    647

BSNT_03332___    651 AATCGAATTCTGGATGATCGAACCGGAAATGGCGTTTGTAGAATTTGAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    648 AATCGAATTCTGGATGATCGAACCGGAAATGGCGTTTGTAGAATTTGAAG    697

BSNT_03332___    701 AAAACCTTCAAGTACAGGAAAATTACGTTTCTTTCATCGTACAATCAGTT    750
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU22360___as    698 AAAACCTTCAAGTACAGGAAAATTACGTTTCTTTCATCGTGCAATCAGTT    747

BSNT_03332___    751 CTTAAGAATTGTAAAATTGAATTAAACACATTGGGAAGAGACACGTCAAA    800
                     |||||.|||||.|||||||||.||||||||||||||||||||||||||||
BSU22360___as    748 CTTAAAAATTGCAAAATTGAACTAAACACATTGGGAAGAGACACGTCAAA    797

BSNT_03332___    801 ACTTGAGCAAATCAAAGCTCCGTTCCCAAGAATCACGTATGATGAAGCGA    850
                     ||||||||||||||||||.||||||||||||||.||||||||||||||||
BSU22360___as    798 ACTTGAGCAAATCAAAGCCCCGTTCCCAAGAATTACGTATGATGAAGCGA    847

BSNT_03332___    851 TTGAATTTCTGAAAGAAAAAGGCTTTGACGATATCGAGTGGGGAGATGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    848 TTGAATTTCTGAAAGAAAAAGGCTTTGACGATATCGAGTGGGGAGATGAT    897

BSNT_03332___    901 TTCGGAGCGCCTCATGAAACAGCGATTGCTGAACACTATGACAAACCGGT    950
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU22360___as    898 TTCGGAGCGCCTCATGAAACAGCGATTGCTGAACATTATGACAAACCGGT    947

BSNT_03332___    951 ATTCATCACTCGCTATCCGACGTCCTTAAAACCGTTCTATATGCAGCCGG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    948 ATTCATCACTCGCTATCCGACGTCCTTAAAACCGTTCTATATGCAGCCGG    997

BSNT_03332___   1001 CTTCTGACCGTGAGGACGTTGTGCTTTGCGCTGACTTGATTGCGCCGGAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as    998 CTTCTGACCGTGAGGACGTTGTGCTTTGCGCTGACTTGATTGCGCCGGAA   1047

BSNT_03332___   1051 GGCTATGGAGAAATCATCGGCGGGTCTGAACGGATTCACGATATGGAACT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as   1048 GGCTATGGAGAAATCATCGGCGGGTCTGAACGGATTCACGATATGGAACT   1097

BSNT_03332___   1101 TTTGGAATCGCGTCTTAAAGAACATGGACTGGATTCTGACGCATATAAAT   1150
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU22360___as   1098 TTTGGAATCGCGTCTTAAAGAACATGGACTGGATTCTGACGCTTATAAAT   1147

BSNT_03332___   1151 GGTATGCTGAACTTAGAAAATATGGATCAGTTCCTCATTCCGGCTTCGGC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as   1148 GGTATGCTGAACTTAGAAAATATGGATCAGTTCCTCATTCCGGCTTCGGC   1197

BSNT_03332___   1201 CTTGGATTAGAGCGGACAGTAGCTTGGATCAGCGGAGCGCCTCACGTTCG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as   1198 CTTGGATTAGAGCGGACAGTAGCTTGGATCAGCGGAGCGCCTCACGTTCG   1247

BSNT_03332___   1251 TGAAACGATTCCGTTCCCAAGACTGTTAAACCGTCTGTATCCGTAA   1296
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU22360___as   1248 TGAAACGATTCCGTTCCCAAGACTGTTAAACCGTCTGTATCCGTAA   1293


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