Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03356 and BSU22560

See Amino acid alignment / Visit BSNT_03356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence dna-align/BSNT_03356___qcrA.1.22522.seq
#    -bsequence dna-align/BSU22560___qcrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03356___qcrA-BSU22560___qcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03356___qcrA-BSU22560___qcrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: BSU22560___qcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     502/504 (99.6%)
# Similarity:   502/504 (99.6%)
# Gaps:           0/504 ( 0.0%)
# Score: 2502.0
# 
#
#=======================================

BSNT_03356___      1 ATGGGCGGAAAACATGATATATCCAGACGTCAATTTTTGAATTACACGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU22560___qc      1 ATGGGCGGAAAACATGATATATCCAGACGTCAATTTTTGAATTATACGCT     50

BSNT_03356___     51 CACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGGTTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc     51 CACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGGTTC    100

BSNT_03356___    101 GCTTCGCACTCGACCCGGTATTAAAATCGACAGGGAAGCAGGATATGGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    101 GCTTCGCACTCGACCCGGTATTAAAATCGACAGGGAAGCAGGATATGGTT    150

BSNT_03356___    151 CAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGATTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    151 CAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGATTT    200

BSNT_03356___    201 TAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAGATCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    201 TAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAGATCAG    250

BSNT_03356___    251 CCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATTTGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    251 CCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATTTGT    300

BSNT_03356___    301 AAACATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAACCCGAA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    301 AAGCATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAACCCGAA    350

BSNT_03356___    351 TAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCACCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    351 TAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCACCA    400

BSNT_03356___    401 ATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    401 ATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAAGAA    450

BSNT_03356___    451 GTAAAAGACGGCTTCCTGTATCTTGGAAAAGCAAAGCCTAAGGGGGAAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22560___qc    451 GTAAAAGACGGCTTCCTGTATCTTGGAAAAGCAAAGCCTAAGGGGGAAGG    500

BSNT_03356___    501 GTGA    504
                     ||||
BSU22560___qc    501 GTGA    504


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