Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03393 and BSU22820

See Amino acid alignment / Visit BSNT_03393 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence dna-align/BSNT_03393___yphE.1.22522.seq
#    -bsequence dna-align/BSU22820___yphE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03393___yphE-BSU22820___yphE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03393___yphE-BSU22820___yphE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BSU22820___yphE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity:     202/204 (99.0%)
# Similarity:   202/204 (99.0%)
# Gaps:           0/204 ( 0.0%)
# Score: 1002.0
# 
#
#=======================================

BSNT_03393___      1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCACTAGGGTCCATGGGTCT     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU22820___yp      1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCTCTAGGGTCCATGGGTCT     50

BSNT_03393___     51 GATGTTTCTGGCTGTAGCTTCCATCTATTTAAGCCGCTTTAAGTGCCAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22820___yp     51 GATGTTTCTGGCTGTAGCTTCCATCTATTTAAGCCGCTTTAAGTGCCAAA    100

BSNT_03393___    101 ACCGTTTTTTGAAGATTACGATTTCATCATTCGCATACATGTGTATGCTC    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU22820___yp    101 ACCGTTTTTTGAAGATTGCGATTTCATCATTCGCATACATGTGTATGCTC    150

BSNT_03393___    151 ATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTGTCAATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22820___yp    151 ATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTGTCAATGA    200

BSNT_03393___    201 ATAA    204
                     ||||
BSU22820___yp    201 ATAA    204


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