Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03424 and BSU23000

See Amino acid alignment / Visit BSNT_03424 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence dna-align/BSNT_03424___ypbE.1.22522.seq
#    -bsequence dna-align/BSU23000___ypbE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03424___ypbE-BSU23000___ypbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03424___ypbE-BSU23000___ypbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03424___ypbE
# 2: BSU23000___ypbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity:     723/723 (100.0%)
# Similarity:   723/723 (100.0%)
# Gaps:           0/723 ( 0.0%)
# Score: 3615.0
# 
#
#=======================================

BSNT_03424___      1 ATGACGAACATGTCGAGAGTAGAGAGAAGAAAAGCCCAGAATCTTTATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp      1 ATGACGAACATGTCGAGAGTAGAGAGAAGAAAAGCCCAGAATCTTTATGA     50

BSNT_03424___     51 AGATCAAAACGCCGCATTGGCGGACGATTATGTCGATGATGGAGAAAGCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp     51 AGATCAAAACGCCGCATTGGCGGACGATTATGTCGATGATGGAGAAAGCC    100

BSNT_03424___    101 TTCCGACAAGACAATCTGTAAAAAATCAAAGAGAACAGAAAAAAAAGCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    101 TTCCGACAAGACAATCTGTAAAAAATCAAAGAGAACAGAAAAAAAAGCAA    150

BSNT_03424___    151 GGCAAAACAAAAACGCCATTATTCACAGTACTCGCAGTAATATTTGTATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    151 GGCAAAACAAAAACGCCATTATTCACAGTACTCGCAGTAATATTTGTATT    200

BSNT_03424___    201 TGTGCCGGTTATCGTTTTAGTCACCTTATTTTATCTAAAGAGCCACCCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    201 TGTGCCGGTTATCGTTTTAGTCACCTTATTTTATCTAAAGAGCCACCCGG    250

BSNT_03424___    251 ATAATCATGACGATTATGAAGATGTTTTTATTGACAGCAGCCAAAGCAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    251 ATAATCATGACGATTATGAAGATGTTTTTATTGACAGCAGCCAAAGCAAA    300

BSNT_03424___    301 TATGAGGTTGTCCCGAAATCAGAGGATAAAAACGATACCGCAGACACTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    301 TATGAGGTTGTCCCGAAATCAGAGGATAAAAACGATACCGCAGACACTAA    350

BSNT_03424___    351 AGAAACCGCACTGCAGAAGGAGTCAAAAAAAGAGCCAGAAGATTCCAAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    351 AGAAACCGCACTGCAGAAGGAGTCAAAAAAAGAGCCAGAAGATTCCAAGC    400

BSNT_03424___    401 CAAAAGAGCAAACAGCTGCTGATAAGAAACAGACTGCTGTAGCGGAAAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    401 CAAAAGAGCAAACAGCTGCTGATAAGAAACAGACTGCTGTAGCGGAAAAA    450

BSNT_03424___    451 GAAGACTCGCCAAATAAGGAGGAAGCAACCGCCGCGGCTGCTTCCTCTTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    451 GAAGACTCGCCAAATAAGGAGGAAGCAACCGCCGCGGCTGCTTCCTCTTC    500

BSNT_03424___    501 CCAATCAACAGTACAACAGCAAGAACAGCCAGCTGAGCCAGTTCAAAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    501 CCAATCAACAGTACAACAGCAAGAACAGCCAGCTGAGCCAGTTCAAAATG    550

BSNT_03424___    551 TGCCGAATCGCGTTGTCAAGCACACCGTCCAAAAGAAAGAAACGCTATAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    551 TGCCGAATCGCGTTGTCAAGCACACCGTCCAAAAGAAAGAAACGCTATAC    600

BSNT_03424___    601 CGCATTTCCATGAAGTATTATAAAAGCCGGACAGGAGAAGAAAAAATTCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    601 CGCATTTCCATGAAGTATTATAAAAGCCGGACAGGAGAAGAAAAAATTCG    650

BSNT_03424___    651 AGCATATAATCATCTGAATGGAAATGATGTTTACACCGGACAAGTTTTGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23000___yp    651 AGCATATAATCATCTGAATGGAAATGATGTTTACACCGGACAAGTTTTGG    700

BSNT_03424___    701 ACATCCCTTTAATGGATGAATAG    723
                     |||||||||||||||||||||||
BSU23000___yp    701 ACATCCCTTTAATGGATGAATAG    723


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.