Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03456 and BSU23220

See Amino acid alignment / Visit BSNT_03456 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence dna-align/BSNT_03456___scpA.1.22522.seq
#    -bsequence dna-align/BSU23220___ypuG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03456___scpA-BSU23220___ypuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03456___scpA-BSU23220___ypuG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03456___scpA
# 2: BSU23220___ypuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 756
# Identity:     750/756 (99.2%)
# Similarity:   750/756 (99.2%)
# Gaps:           0/756 ( 0.0%)
# Score: 3726.0
# 
#
#=======================================

BSNT_03456___      1 ATGGAAGAATATCAAGTGAAAATTGATACGTTTGAGGGCCCATTGGACCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp      1 ATGGAAGAATATCAAGTGAAAATTGATACGTTTGAGGGCCCATTGGACCT     50

BSNT_03456___     51 GCTGCTTCATTTAATCAATCGTCTTGAAATTGACATATATGATATACCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp     51 GCTGCTTCATTTAATCAATCGTCTTGAAATTGACATATATGATATACCTG    100

BSNT_03456___    101 TGGCGAAGATCACTGAACAATATTTATTATATGTACATACGATGCGTGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU23220___yp    101 TGGCGAAGATCACTGAACAATATTTATTATATGTACATACGATGCGCGTG    150

BSNT_03456___    151 CTTGAGCTCGATATGGCCAGCGAGTATTTGGTTATGGCTGCCACGCTGCT    200
                     |||||||||||.||.|||||||||||||||||||||||||||||||||||
BSU23220___yp    151 CTTGAGCTCGACATTGCCAGCGAGTATTTGGTTATGGCTGCCACGCTGCT    200

BSNT_03456___    201 CAGCATTAAAAGCAGAATGCTGCTCCCGAAGCAAGAGGAGGAGCTTTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    201 CAGCATTAAAAGCAGAATGCTGCTCCCGAAGCAAGAGGAGGAGCTTTTTG    250

BSNT_03456___    251 AAGATGAATTACTTGAAGAAGAAGATCCGCGGGAGGAACTGATTGAAAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    251 AAGATGAATTACTTGAAGAAGAAGATCCGCGGGAGGAACTGATTGAAAAG    300

BSNT_03456___    301 CTGATTGAGTATCGAAAATATAAAGATGCGGCGAAGGATTTAAAAGAACG    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU23220___yp    301 CTGATTGAGTACCGAAAATATAAAGATGCGGCGAAGGATTTAAAAGAACG    350

BSNT_03456___    351 GGAAGAAGAAAGACAAAAATCGTTCACGAAACCGCCGAGTGATTTGAGTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    351 GGAAGAAGAAAGACAAAAATCGTTCACGAAACCGCCGAGTGATTTGAGTG    400

BSNT_03456___    401 AATATGCAAAAGAAGTAAAACAGTCTGAGCAAAAGCTCTCTGTCACGGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    401 AATATGCAAAAGAAGTAAAACAGTCTGAGCAAAAGCTCTCTGTCACGGTC    450

BSNT_03456___    451 TATGATATGATCGGAGCTTTTCAAAAAGTGCTGAAACGCAAAAAAATAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    451 TATGATATGATCGGAGCTTTTCAAAAAGTGCTGAAACGCAAAAAAATAAA    500

BSNT_03456___    501 CAGGCCGATGGAAACAACAATTACAAGACAGGACATACCAATCGAAGCCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    501 CAGGCCGATGGAAACAACAATTACAAGACAGGACATACCAATCGAAGCCA    550

BSNT_03456___    551 GAATGAACGAAATCGTGCACAGCTTGAAATCTAGAGGAACGAGAATCAAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU23220___yp    551 GAATGAACGAAATCGTGCACAGCTTGAAATCTAGAGGAACGAGAATTAAC    600

BSNT_03456___    601 TTTATGGATCTGTTTCCATATGAGCAAAAAGAACATTTAGTAGTGACCTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    601 TTTATGGATCTGTTTCCATATGAGCAAAAAGAACATTTAGTAGTGACCTT    650

BSNT_03456___    651 TCTAGCTGTTCTCGAGCTGATGAAAAATCAGCTGGTCCTCATTGAACAGG    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23220___yp    651 TCTAGCTGTTCTTGAGCTGATGAAAAATCAGCTGGTCCTCATTGAACAGG    700

BSNT_03456___    701 AGCACAATTTTTCAGATATTTACATTACGGGGAGTGAATCCATTCATGGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23220___yp    701 AGCACAATTTTTCAGATATTTACATTACGGGGAGTGAATCCATTCATGGG    750

BSNT_03456___    751 GCTTGA    756
                     ||||||
BSU23220___yp    751 GCTTGA    756


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