Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03489 and BSU23450

See Amino acid alignment / Visit BSNT_03489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:17
# Commandline: needle
#    -asequence dna-align/BSNT_03489___sigF.1.22522.seq
#    -bsequence dna-align/BSU23450___sigF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03489___sigF-BSU23450___sigF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03489___sigF-BSU23450___sigF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03489___sigF
# 2: BSU23450___sigF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     767/768 (99.9%)
# Similarity:   767/768 (99.9%)
# Gaps:           0/768 ( 0.0%)
# Score: 3831.0
# 
#
#=======================================

BSNT_03489___      1 ATGGATGTGGAGGTTAAGAAAAACGGCAAAAACGCTCAGCTGAAGGATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si      1 ATGGATGTGGAGGTTAAGAAAAACGGCAAAAACGCTCAGCTGAAGGATCA     50

BSNT_03489___     51 TGAAGTAAAGGAATTAATCAAACAAAGCCAAAATGGCGACCAGCAGGCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si     51 TGAAGTAAAGGAATTAATCAAACAAAGCCAAAATGGCGACCAGCAGGCAA    100

BSNT_03489___    101 GAGACCTCCTCATAGAAAAAAACATGCGTCTTGTTTGGTCTGTCGTACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    101 GAGACCTCCTCATAGAAAAAAACATGCGTCTTGTTTGGTCTGTCGTACAG    150

BSNT_03489___    151 CGGTTTTTAAACAGAGGATATGAGCCTGACGATCTCTTCCAGATCGGCTG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    151 CGGTTTTTAAACAGAGGATATGAGCCTGACGATCTCTTCCAGATCGGCTG    200

BSNT_03489___    201 CATCGGGCTGTTAAAATCTGTTGACAAATTTGATTTAACCTATGATGTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    201 CATCGGGCTGTTAAAATCTGTTGACAAATTTGATTTAACCTATGATGTGC    250

BSNT_03489___    251 GTTTTTCAACGTATGCAGTGCCGATGATTATCGGAGAAATCCAACGATTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    251 GTTTTTCAACGTATGCAGTGCCGATGATTATCGGAGAAATCCAACGATTT    300

BSNT_03489___    301 ATCCGTGATGACGGAACCGTAAAGGTATCACGGTCATTAAAAGAGCTTGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    301 ATCCGTGATGACGGAACCGTAAAGGTATCACGGTCATTAAAAGAGCTTGG    350

BSNT_03489___    351 AAACAAAATCCGGCGCGCGAAGGATGAGCTTTCGAAAACACTGGGCAGAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    351 AAACAAAATCCGGCGCGCGAAGGATGAGCTTTCGAAAACACTGGGCAGAG    400

BSNT_03489___    401 TGCCGACGGTGCAGGAGATCGCTGACCATTTGGAGATTGAAGCTGAGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    401 TGCCGACGGTGCAGGAGATCGCTGACCATTTGGAGATTGAAGCTGAGGAT    450

BSNT_03489___    451 GTTGTACTGGCCCAAGAGGCGGTAAGGGCTCCATCTTCGATTCACGAAAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    451 GTTGTACTGGCCCAAGAGGCGGTAAGGGCTCCATCTTCGATTCACGAAAC    500

BSNT_03489___    501 CGTTTATGAAAATGACGGAGATCCGATTACCCTGCTTGATCAAATCGCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    501 CGTTTATGAAAATGACGGAGATCCGATTACCCTGCTTGATCAAATCGCTG    550

BSNT_03489___    551 ACAACTCAGAAGAAAAATGGTTTGACAAAATTGCGCTGAAAGAAGCAATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU23450___si    551 ACAACTCAGAAGAAAAATGGTTTGACAAAATTGCGCTGAAAGAAGCGATC    600

BSNT_03489___    601 AGCGATTTGGAGGAAAGGGAAAAACTAATCGTCTATCTCAGATATTATAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    601 AGCGATTTGGAGGAAAGGGAAAAACTAATCGTCTATCTCAGATATTATAA    650

BSNT_03489___    651 AGACCAGACACAGTCCGAGGTGGCTGAGCGGCTCGGGATCTCTCAGGTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    651 AGACCAGACACAGTCCGAGGTGGCTGAGCGGCTCGGGATCTCTCAGGTGC    700

BSNT_03489___    701 AGGTTTCCAGGCTTGAAAAGAAAATATTAAAACAGATCAAGGTTCAAATG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23450___si    701 AGGTTTCCAGGCTTGAAAAGAAAATATTAAAACAGATCAAGGTTCAAATG    750

BSNT_03489___    751 GATCATACGGATGGCTAG    768
                     ||||||||||||||||||
BSU23450___si    751 GATCATACGGATGGCTAG    768


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