Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03494 and BSU23490

See Amino acid alignment / Visit BSNT_03494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence dna-align/BSNT_03494___punA.1.22522.seq
#    -bsequence dna-align/BSU23490___pupG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03494___punA-BSU23490___pupG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03494___punA-BSU23490___pupG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03494___punA
# 2: BSU23490___pupG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     813/816 (99.6%)
# Similarity:   813/816 (99.6%)
# Gaps:           0/816 ( 0.0%)
# Score: 4053.0
# 
#
#=======================================

BSNT_03494___      1 TTGAAGGACAGAATTGAACGCGCAGCCGCTTTTATTAAACAAAACCTGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu      1 TTGAAGGACAGAATTGAACGCGCAGCCGCTTTTATTAAACAAAACCTGCC     50

BSNT_03494___     51 GGAATCTCCGAAGATCGGCCTTATTTTAGGCTCAGGTCTTGGCATTTTGG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU23490___pu     51 GGAATCTCCAAAGATCGGCCTTATTTTAGGCTCAGGTCTTGGCATTTTGG    100

BSNT_03494___    101 CGGACGAAATCGAAAATCCGGTCAAGCTGAAATATGAAGATATACCTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    101 CGGACGAAATCGAAAATCCGGTCAAGCTGAAATATGAAGATATACCTGAA    150

BSNT_03494___    151 TTCCCGGTATCTACTGTTGAAGGGCATGCCGGACAGCTTGTGCTTGGCAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    151 TTCCCGGTATCTACTGTTGAAGGGCATGCCGGACAGCTTGTGCTTGGCAC    200

BSNT_03494___    201 TCTTGAAGGAGTTTCCGTCATTGCAATGCAGGGCCGCTTTCATTTTTATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    201 TCTTGAAGGAGTTTCCGTCATTGCAATGCAGGGCCGCTTTCATTTTTATG    250

BSNT_03494___    251 AAGGCTACTCAATGGAGAAAGTCACATTCCCTGTACGCGTGATGAAAGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    251 AAGGCTACTCAATGGAGAAAGTCACATTCCCTGTACGCGTGATGAAAGCG    300

BSNT_03494___    301 CTCGGTGTGGAAGCGTTGATCGTGACAAATGCCGCAGGCGGTGTCAACAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    301 CTCGGTGTGGAAGCGTTGATCGTGACAAATGCCGCAGGCGGTGTCAACAC    350

BSNT_03494___    351 TGAATTCCGTGCGGGAGACTTAATGATTATTACCGATCATATCAACTTTA    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU23490___pu    351 TGAATTCCGTGCGGGAGATTTAATGATTATTACCGATCATATCAACTTTA    400

BSNT_03494___    401 TGGGAACAAACCCGTTAATCGGGCCAAACGAAGCAGATTTCGGCGCCAGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    401 TGGGAACAAACCCGTTAATCGGGCCAAACGAAGCAGATTTCGGCGCCAGA    450

BSNT_03494___    451 TTTCCAGATATGTCTTCAGCCTATGACAAAGATCTGTCCAGCCTGGCTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    451 TTTCCAGATATGTCTTCAGCCTATGACAAAGATCTGTCCAGCCTGGCTGA    500

BSNT_03494___    501 AAAGATTGCGAAAGACCTTAATATCCCAATTCAAAAAGGCGTGTACACTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    501 AAAGATTGCGAAAGACCTTAATATCCCAATTCAAAAAGGCGTGTACACTG    550

BSNT_03494___    551 CTGTGACAGGACCTTCTTACGAAACACCGGCAGAAGTCCGTTTCTTAAGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    551 CTGTGACAGGACCTTCTTACGAAACACCGGCAGAAGTCCGTTTCTTAAGA    600

BSNT_03494___    601 ACGATGGGCTCTGATGCAGTCGGCATGTCTACTGTTCCGGAAGTCATTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    601 ACGATGGGCTCTGATGCAGTCGGCATGTCTACTGTTCCGGAAGTCATTGT    650

BSNT_03494___    651 AGCGAATCATGCGGGAATGCGGGTTCTTGGCATTTCCTGCATCTCTAACG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    651 AGCGAATCATGCGGGAATGCGGGTTCTTGGCATTTCCTGCATCTCTAACG    700

BSNT_03494___    701 CGGCAGCCGGAATTCTGGATCAGCCTTTAAGTCACGATGAAGTGATGGAA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU23490___pu    701 CGGCAGCCGGAATTCTGGATCAGCCTTTAAGTCACGATGAAGTTATGGAA    750

BSNT_03494___    751 GTGACCGAAAAAGTAAAAGCTGGATTCTTAAAGCTTGTTAAAGCGATCGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23490___pu    751 GTGACCGAAAAAGTAAAAGCTGGATTCTTAAAGCTTGTTAAAGCGATCGT    800

BSNT_03494___    801 CGCTCAGTACGAATAA    816
                     ||||||||||||||||
BSU23490___pu    801 CGCTCAGTACGAATAA    816


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