Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03527 and BSU23710

See Amino acid alignment / Visit BSNT_03527 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence dna-align/BSNT_03527___yqjW.1.22522.seq
#    -bsequence dna-align/BSU23710___yqjW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03527___yqjW-BSU23710___yqjW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03527___yqjW-BSU23710___yqjW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03527___yqjW
# 2: BSU23710___yqjW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1239
# Identity:    1223/1239 (98.7%)
# Similarity:  1223/1239 (98.7%)
# Gaps:           3/1239 ( 0.2%)
# Score: 6063.0
# 
#
#=======================================

BSNT_03527___      1 ---ATGAAAGAAAAAGTGATTTTTCTCGTTGACATGCAATCGTTTTATGC     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq      1 ATGATGAAAGAAAAAGTGATTTTTCTCGTTGACATGCAATCGTTTTATGC     50

BSNT_03527___     48 ATCTGTAGAGAAAGCGGAAAATCCACATTTGAAAAATAGGCCCGTCATTG     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq     51 ATCTGTAGAGAAAGCGGAAAATCCACATTTGAAAAATAGGCCCGTCATTG    100

BSNT_03527___     98 TTTCGGGTGACCCTGAAAAAAGGGGCGGAGTGGTATTGGCTGCCTGCCCG    147
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU23710___yq    101 TTTCGGGTGACCCTGAAAAAAGGGGCGGAGTCGTATTGGCTGCCTGCCCG    150

BSNT_03527___    148 CTGGCGAAACAAAAAGGTGTGGTGAATGCTTCACGGCTGTGGGAGGCGCA    197
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU23710___yq    151 CTGGCGAAACAAAAGGGTGTGGTGAATGCTTCACGGCTGTGGGAGGCGCA    200

BSNT_03527___    198 GGAAAAGTGTCCTGAGGCTGTTGTGCTCCGGCCGCGTATGCAGCGGTATA    247
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    201 GGAAAAGTGTCCTGAGGCTGTTGTGCTCCGGCCGCGTATGCAGCGGTATA    250

BSNT_03527___    248 TTGATGTATCACTGCAAATTACGGCCATTCTCGAGGAGTATACAGACCTT    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    251 TTGATGTATCACTGCAAATTACGGCCATTCTCGAGGAGTATACAGACCTT    300

BSNT_03527___    298 GTGGAGCCTTATTCCATCGATGAACAGTTCATGGACATTACAGGCAGCCA    347
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    301 GTGGAGCCGTATTCCATCGATGAACAGTTCATGGACATTACAGGCAGCCA    350

BSNT_03527___    348 GAAGCTGTTTGGGACGCCGATGGAGATCGCGAAAAGCATTCAGGGCAGAA    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    351 GAAGCTGTTTGGGACGCCGATGGAGATCGCGAAAAGCATTCAGGGCAGAA    400

BSNT_03527___    398 TCATGCGGGAGATCGGCGTTTATGCGCGGGTCGGAATCGGCCCTAACAAA    447
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU23710___yq    401 TCATGCGGGAGATCGGCGTTTATGCACGGGTCGGAATCGGCCCTAACAAA    450

BSNT_03527___    448 GCGCTGGCCAAAATTGCGTGTGACAATTTTGCCAAAAAGAATAAAAACGG    497
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU23710___yq    451 GCGCTGGCCAAAATTGCGTGTGACAATTTTGCCAAAAAGAATAAGAACGG    500

BSNT_03527___    498 TATTTTTACCTTAACGAAAGAAAATATGAAAACCGAAATGTGGCCGCTCC    547
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    501 TATTTTTACCTTAACGAAAGAAAATATGAAAACCGAAATGTGGCCGCTCC    550

BSNT_03527___    548 CGGTGGGCAGCATGTTTGGCGTCGGGAGCCGCATGAAGCATCATTTAAAT    597
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    551 CGGTGGGCAGCATGTTTGGCGTCGGGAGCCGCATGAAGCATCATTTAAAT    600

BSNT_03527___    598 CGAATGGGCATCAGCACGATCGGCGGGCTCGCGGCTTTTCCGCTCGATCT    647
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    601 CGAATGGGCATCAGCACGATCGGCGGGCTCGCGGCTTTTCCGCTCGATCT    650

BSNT_03527___    648 TTTAAAAAAGAAATGGGGCATTAACGGCCACGTGCTGTGGATGACGGCAA    697
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    651 TTTAAAAAAGAAATGGGGCATTAACGGCCACGTGCTGTGGATGACGGCAA    700

BSNT_03527___    698 ACGGAATCGACTATTCCCCTGTGTCAACTTCGTCTCTGGACGGGCAAAAG    747
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    701 ACGGAATCGACTATTCCCCTGTGTCAACTTCGTCTCTGGACGGGCAAAAG    750

BSNT_03527___    748 GCGATAGGCCATGGAATGACTCTCCCGAGAGACTACGAACACTTTGACAA    797
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    751 GCGATAGGTCATGGAATGACTCTCCCGAGAGACTACGAACACTTTGACAA    800

BSNT_03527___    798 AGAAATCAAGGTCGTATTGCTTGAGCTGAGTGAAGAGGTGTGCAGGCGAA    847
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    801 AGAAATCAAGGTCGTATTGCTTGAGCTGAGTGAAGAGGTGTGCAGGCGAA    850

BSNT_03527___    848 GCCGAAACGCCGGGGTCATGGGGCAGACAGTGTCAGTGAGCTGCCGGGGT    897
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    851 GCCGAAACGCCGGGGTCATGGGGCAGACAGTGTCAGTGAGCTGCCGGGGT    900

BSNT_03527___    898 GCTGATTTTGATTGGCCGACGGGCTTCAACCGGCAAGTGAAGCTGGCAGA    947
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq    901 GCTGATTTTGATTGGCCGACGGGCTTCAACCGGCAAGTGAAGCTGGCAGA    950

BSNT_03527___    948 GCCGACTAATTCTACGCAGGATGTATATGAGGCTGTACGCCGGCTGTTTC    997
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU23710___yq    951 GCCGACTAATTCTACGCAGGATGTATATGAGGCTGTACGACGGCTGTTTC   1000

BSNT_03527___    998 TTACATTTTGGGACGGGAAACCTGTCCGCCGTCTCGGTGTCAATCTGTCT   1047
                     ||||||||||||||||||||||.||||||||.||||||||||||||||||
BSU23710___yq   1001 TTACATTTTGGGACGGGAAACCCGTCCGCCGCCTCGGTGTCAATCTGTCT   1050

BSNT_03527___   1048 CAGCTCTCATCTGATGACATATGGCAGCTCAATTTATTTCAGGATTATGC   1097
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq   1051 CAGCTCTCATCTGATGACATATGGCAGCTCAATTTATTTCAGGATTATGC   1100

BSNT_03527___   1098 AAAGAAAATGAGCCTAGGCTATGTGATGGACGGCATTAAAAATCGATTCG   1147
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU23710___yq   1101 AAAGAAAATGAGCCTAGGCTATGTGATGGATGGCATTAAAAATCGATTCG   1150

BSNT_03527___   1148 GCGACACAGCAATCATCAGGGCGGCGTCACTGACAGCGGCAGGCCAGGCA   1197
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU23710___yq   1151 GCGATACAGCAATCATCAGGGCGGCGTCACTGACAGCGGCAGGCCAGGCA   1200

BSNT_03527___   1198 TTTGAACGCGCGGCTAAAATAGGGGGGCACTATAAATGA   1236
                     ||||||||.||||||||||||||||||||.|||||||||
BSU23710___yq   1201 TTTGAACGTGCGGCTAAAATAGGGGGGCATTATAAATGA   1239


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